RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Cnga2Q62398 664 aa12.92□□□□□ -0.34
Trim9-202ENSMUST00000110522 Tpcn2Q8BWC0 731 aa12.92□□□□□ -0.34
Trim9-202ENSMUST00000110522 Plcd1Q8R3B1 756 aa12.92□□□□□ -0.34
Trim9-202ENSMUST00000110522 Prr29B1ARI9 187 aa12.92□□□□□ -0.34
Trim9-202ENSMUST00000110522 Prr16A3KMN5 304 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 1700029H14RikE9PY36 240 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Gpr182P43142 395 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Anp32eP97822 260 aaKnown RBP12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Phldb2Q8K1N2 1249 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Pcdhb22Q91XZ8 794 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Dph6Q9CQ28 267 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Mrpl12Q9DB15 201 aaKnown RBP12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Akr1c19G3X9Y6 323 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Pank2Q3U4S0 443 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 2310002L09RikQ9D7L5 217 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Kiaa1210E9Q0C6 1637 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Tmx1Q8VBT0 278 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Uhrf1bp1B2KF50 1429 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Abcc12Q80WJ6 1366 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Itsn2Q9Z0R6 1659 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Atp8b3Q6UQ17 1335 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Jakmip2D3YXK0 820 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Fam84aQ9D650 292 aa12.91□□□□□ -0.34
Trim9-202ENSMUST00000110522 Jdp2P97875 163 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Cdan1Q8CC12 1239 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Clip2Q9Z0H8 1047 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Cdhr2E9Q7P9 1308 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Pard3Q99NH2 1333 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Map7d2A2AG50 781 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Eme2Q56A04 373 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Tacc1Q6Y685 774 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Ercc6lQ8BHK9 1240 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Ano2Q8CFW1 1002 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Themis2Q91YX0 663 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Rbm43Q99J64 343 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 A0A1W2P7S8 802 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 TrdnE9Q9K5 693 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Nucb2P81117 420 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Pex1Q5BL07 1284 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Cdc5lQ6A068 802 aaKnown RBP12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Rufy1Q8BIJ7 712 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Lrrc59Q922Q8 307 aaKnown RBP12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Ttc5Q99LG4 440 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Atp7bQ64446 1462 aa12.9□□□□□ -0.34
Trim9-202ENSMUST00000110522 Gemin5Q8BX17 1502 aaKnown RBP12.9□□□□□ -0.35
Trim9-202ENSMUST00000110522 Pafah1b1P63005 410 aaKnown RBP12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 CenphQ9QYM8 241 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Gm30191A0A0U1RNT7 187 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Prl3d1P18121 224 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Q9D5Q8 446 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Lrrfip1Q3UZ39 729 aaKnown RBP12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Klhl30Q8C3F7 581 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Aox1O54754 1333 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 1700006A11RikB9EHI3 544 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 MarcksP26645 309 aaKnown RBP12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 NpeppsQ11011 920 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 RragbQ6NTA4 374 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Kcnj14Q8JZN3 434 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Atp12aQ9Z1W8 1035 aa12.89□□□□□ -0.35
Trim9-202ENSMUST00000110522 Sh3tc1G3X9F6 1346 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Slc4a8Q8JZR6 1089 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Pde3aQ9Z0X4 1141 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cdc42bpgQ80UW5 1551 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ncf1Q09014 390 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Plbd2Q3TCN2 594 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Antxr1Q9CZ52 562 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Trim56Q80VI1 734 aaKnown RBP12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 ParnQ8VDG3 624 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Erbb4Q61527 1308 aa12.88□□□□□ -0.35
Trim9-202ENSMUST00000110522 Mrpl50Q8VDT9 159 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Knop1Q9Z2Q2 478 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Zcchc11B2RX14 1644 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Nfil3O08750 462 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cbx1P83917 185 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Uri1Q3TLD5 531 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Asap2Q7SIG6 958 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ankrd23Q812A3 306 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ubac1Q8VDI7 409 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Snw1Q9CSN1 536 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 PtprmP28828 1452 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ccdc129Q14B48 1034 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Nxf7Q80SZ6 620 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ripor2Q80U16 1078 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Wdr24Q8CFJ9 790 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Prr5lA2AVJ5 370 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Pde8bE9Q4S1 865 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Eif6O55135 245 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 ArsiQ32KI9 573 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Zkscan4Q5SZT6 480 aa12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Abcf1Q6P542 837 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ssr1Q9CY50 286 aaKnown RBP12.87□□□□□ -0.35
Trim9-202ENSMUST00000110522 Rps8P62242 208 aaKnown RBP12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Luc7l2Q7TNC4 392 aaKnown RBP12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Sass6Q80UK7 654 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Vps18Q8R307 973 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Col4a3bpQ9EQG9 624 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Tfcp2Q9ERA0 502 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Mrvi1Q9WUX5 899 aaKnown RBP12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Mroh1E0CZ22 1640 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Sycp2lA0A0M3U1B0 842 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms