RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ppil4Q9CXG3 492 aaKnown RBP27.14■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Pmfbp1Q9WVQ0 1022 aa27.14■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Rbbp8nlA2ABX0 614 aa27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Eddm13E9Q7F5 164 aa27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 XpcP51612 930 aa27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Vil1Q62468 827 aa27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Rbm15bQ6PHZ5 887 aaKnown RBP27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 HdlbpQ8VDJ3 1268 aaKnown RBP27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Rdm1Q9CQK3 281 aa27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Pik3ap1Q9EQ32 811 aa27.13■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Mast3Q3U214 1321 aa27.12■■□□□ 1.93
Scn1b-201ENSMUST00000098548 A0A1W2P7S8 802 aa27.12■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Usp17lbE9Q9U0 468 aa27.12■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Kifc2O08672 792 aa27.12■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Cdc5lQ6A068 802 aaKnown RBP27.12■■□□□ 1.93
Scn1b-201ENSMUST00000098548 PtmsQ9D0J8 101 aaKnown RBP27.12■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Casq1O09165 405 aa27.11■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Ube3bQ9ES34 1070 aa27.11■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Ly6iQ9WU67 134 aa27.11■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Catsper2A2ARP9 588 aa27.1■■□□□ 1.93
Scn1b-201ENSMUST00000098548 CfhP06909 1234 aa27.1■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Map3k9Q3U1V8 1077 aa27.1■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Ube3cQ80U95 1083 aa27.1■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Gtf2iQ9ESZ8 998 aaKnown RBP27.1■■□□□ 1.93
Scn1b-201ENSMUST00000098548 KinQ8K339 391 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Mroh6V9GX81 722 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Megf6Q80V70 1572 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Myh3P13541 1940 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 MecomP14404 1042 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Ms4a2P20490 235 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 NpeppsQ11011 920 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Ppp1r21Q3TDD9 780 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Spg7Q3ULF4 781 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Jakmip1Q8BVL9 626 aa27.09■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Mxd3Q80US8 206 aa27.08■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Trmt44Q9D2Q2 713 aa27.08■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Cyp27a1Q9DBG1 533 aa27.08■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Myh13B1AR69 1938 aa27.08■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Akap2O54931 893 aa27.07■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Ints3Q7TPD0 1041 aaKnown RBP27.07■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Znf18Q810A1 556 aa27.07■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Ppp4r3bQ922R5 820 aa27.07■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Rnf20Q5DTM8 973 aa27.06■■□□□ 1.92
Scn1b-201ENSMUST00000098548 NsmfQ99NF2 532 aa27.06■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Zfp646Q6NV66 1788 aa27.06■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Psme4Q5SSW2 1843 aa27.06■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Slc7a3P70423 618 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Nell2Q61220 819 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Pdzrn3Q69ZS0 1063 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Nme8Q715T0 586 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Erc1Q99MI1 1120 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 RarsQ9D0I9 660 aaKnown RBP27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Klf15Q9EPW2 415 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Rfx1P48377 963 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Thrap3Q569Z6 951 aaKnown RBP27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Cchcr1Q8K2I2 770 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Ecm29Q6PDI5 1840 aa27.05■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Scn9aQ62205 1984 aa27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Npc1l1Q6T3U4 1333 aa27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Zbtb7aO88939 569 aaKnown RBP27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Stat5bP42232 786 aa27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Pla2g4fQ50L41 855 aa27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Ifit2Q64112 472 aa27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 CbarpQ66L44 698 aa27.04■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Chd5A2A8L1 1946 aa27.03■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Hap1O35668 628 aa27.03■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Psmd1Q3TXS7 953 aa27.03■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Rnf180Q3U827 592 aa27.03■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Filip1lQ6P6L0 1131 aa27.03■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Sept12Q9D451 317 aa27.03■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Prl7d1P04769 244 aa27.02■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Map10Q8BJS7 891 aa27.02■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Bmp2kQ91Z96 1138 aa27.02■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Tuft1O08970 390 aa27.01■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Psmd14O35593 310 aa27.01■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Edrf1Q6GQV7 1239 aa27.01■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Hmg20bQ9Z104 317 aa27.01■■□□□ 1.92
Scn1b-201ENSMUST00000098548 Zkscan1Q8BGS3 561 aaKnown RBP27.01■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Nek11Q8C0Q4 628 aa27.01■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Stag1Q9D3E6 1258 aa27.01■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Ccdc7Q9D541 371 aa27.01■■□□□ 1.91
Scn1b-201ENSMUST00000098548 NogP97466 232 aa27■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Pus3Q9JI38 481 aa27■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Glt1d1A4FUP9 346 aa26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 SfswapQ3USH5 945 aaKnown RBP26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Ddx19aQ61655 478 aaKnown RBP26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Zcwpw1Q6IR42 630 aa26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Ddx31Q6NZQ2 687 aaKnown RBP26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Ubxn10Q8BG34 277 aa26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Uba5Q8VE47 403 aa26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 FliiQ9JJ28 1271 aa26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Psma5Q9Z2U1 241 aaKnown RBP26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 CpdO89001 1377 aa26.99■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Gm3893E9Q1I1 302 aa26.98■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Utp18Q5SSI6 552 aaKnown RBP26.98■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Mlh1Q9JK91 760 aa26.98■■□□□ 1.91
Scn1b-201ENSMUST00000098548 1700006A11RikB9EHI3 544 aa26.97■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Hsp90aa1P07901 733 aaKnown RBP26.97■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Siah1aP61092 282 aa26.97■■□□□ 1.91
Scn1b-201ENSMUST00000098548 Map9Q3TRR0 646 aa26.97■■□□□ 1.91
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms