RNA–Protein interactions for RNA: ENSMUST00000094287.9

Ctcfl-201, Transcript of Transcriptional repressor CTCFL, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ctcfl, Length 3,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcfl-201ENSMUST00000094287 Cplx1P63040 134 aa12.13□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ccnl1Q52KE7 532 aaKnown RBP12.13□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Acap3Q6NXL5 833 aa12.13□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Golph3lQ8R088 285 aaKnown RBP12.13□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ccne2Q9Z238 404 aa12.13□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Nup153E9Q3G8 1462 aaKnown RBP12.13□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Kiaa0232Q80U59 1396 aaKnown RBP12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Dnajc5P60904 198 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ccdc162pQ0VG85 912 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Tbc1d30Q69ZT9 766 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Fsd2Q8BZ52 692 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Alg3Q8K2A8 438 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Otud6bQ8K2H2 294 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ddx27Q921N6 760 aaKnown RBP12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Cap2Q9CYT6 476 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Dusp10Q9ESS0 483 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ccdc112A0AUP1 442 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Atg9aQ68FE2 551 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Wdr3Q8BHB4 942 aaKnown RBP12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ubxn4Q8VCH8 506 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Tlcd1Q99JT6 247 aa12.12□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Vmn2r23E9PXI5 849 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Me1P06801 572 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Irf6P97431 467 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Gsdma2Q32M21 443 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Rad17Q6NXW6 688 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Zbtb40Q6PCS8 1258 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Slu7Q8BHJ9 585 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Paf1Q8K2T8 535 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 ApobrQ8VBT6 942 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Slit2Q9R1B9 1521 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Eya2O08575 532 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Nbr1P97432 988 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Vps37dQ810I0 261 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Cep55Q8BT07 462 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Usp44Q8C2S0 711 aa12.11□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Mcm6P97311 821 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ube2oQ6ZPJ3 1288 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Zkscan8Q8BSL0 588 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Tmc2Q8R4P4 888 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Luzp1Q8R4U7 1068 aaKnown RBP12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Nip7Q9CXK8 180 aaKnown RBP12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Pramel3A2AHA7 463 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Gm7903A2AWL1 463 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 AV320801A2AWL3 467 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Gm15023L7MUB4 467 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Slc4a1P04919 929 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Tpm3P21107 285 aaKnown RBP12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 LyarQ08288 388 aaKnown RBP12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Gtf2f1Q3THK3 508 aaKnown RBP12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 NfkbibQ60778 359 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Pram1Q6BCL1 675 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Trerf1Q8BXJ2 1205 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Rec8Q8C5S7 591 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Cnot6lQ8VEG6 555 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Emilin1Q99K41 1017 aa12.1□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Arfgef2A2A5R2 1792 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 C3P01027 1663 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Dnm1P39053 867 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Atp8b3Q6UQ17 1335 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Actn3O88990 900 aaKnown RBP12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Card10P58660 1021 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ttll12Q3UDE2 639 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Prpf4bQ61136 1007 aaKnown RBP12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Drc7Q6V3W6 876 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Ints5Q8CHT3 1018 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Mtmr3Q8K296 1196 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Kcnk13Q8R1P5 405 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Osbpl5Q9ER64 874 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Washc4Q3UMB9 1173 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Znf653Q6YND2 615 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Lrrc8aQ80WG5 810 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Pnpla2Q8BJ56 486 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Fam213aQ9CYH2 218 aa12.09□□□□□ -0.47
Ctcfl-201ENSMUST00000094287 Chd2E9PZM4 1827 aaKnown RBP12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Stx1aO35526 288 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Tsen34Q8BMZ5 316 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Rapgef3Q8VCC8 918 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 AdnpQ9Z103 1108 aaKnown RBP12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Rgs9O54828 675 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Tnni2P13412 182 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Paxbp1P58501 919 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Pla2g4fQ50L41 855 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Ano10Q8BH79 659 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Slfnl1Q8BHW9 410 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Vps18Q8R307 973 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Col4a3bpQ9EQG9 624 aa12.08□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Agtpbp1Q641K1 1218 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Slc20a2Q80UP8 656 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 BrapQ99MP8 591 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Odf2lQ9D478 642 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Popdc2Q9ES82 367 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 AatfQ9JKX4 526 aaKnown RBP12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Znf568E9PYI1 671 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Ca8P28651 291 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Cdk4P30285 303 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 XpcP51612 930 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Kmt5bQ3U8K7 883 aa12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 Trim25Q61510 634 aaKnown RBP12.07□□□□□ -0.48
Ctcfl-201ENSMUST00000094287 SnrkQ8VDU5 748 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms