RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 LyarQ08288 388 aaKnown RBP12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Trim56Q80VI1 734 aaKnown RBP12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Cdca8Q8BHX3 289 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 AidaQ8C4Q6 305 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Surf1P09925 306 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Gas2l3Q3UWW6 683 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Gnat3Q3V3I2 354 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Cyp2d34L7N463 504 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Ripor2Q80U16 1078 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Dnm3Q8BZ98 863 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Mei4Q8BRM6 389 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Stac3Q8BZ71 360 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Mical1Q8VDP3 1048 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Stxbp4Q9WV89 557 aa12.15□□□□□ -0.46
Tro-201ENSMUST00000087253 Sult6b1P0CC03 303 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Paxbp1P58501 919 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Anks1aP59672 1150 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Alg3Q8K2A8 438 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Tmx1Q8VBT0 278 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Mylk2Q8VCR8 613 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Bcl2l12Q9D3J3 255 aa12.15□□□□□ -0.47
Tro-201ENSMUST00000087253 Sos2Q02384 1333 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 Gm29094F6Q785 221 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 Igflr1Q3U4N7 345 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 Znf532Q6NXK2 1036 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 Rec8Q8C5S7 591 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 Vps18Q8R307 973 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 MthfsQ9D110 203 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 RbsnQ80Y56 783 aa12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 CoblQ5NBX1 1337 aaKnown RBP12.14□□□□□ -0.47
Tro-201ENSMUST00000087253 Ms4a1P19437 291 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Sptlc2P97363 560 aaKnown RBP12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 BcanQ61361 883 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Sec62Q8BU14 398 aaKnown RBP12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Kiaa1524Q8BWY9 907 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Magi2Q9WVQ1 1275 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 HdgfP51859 237 aaKnown RBP12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 CebpaP53566 359 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Exosc10P56960 887 aaKnown RBP12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Lrrc59Q922Q8 307 aaKnown RBP12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Efcab2Q9CQ46 164 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Vmn2r23E9PXI5 849 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Ccdc102aQ3TMW1 549 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Trim25Q61510 634 aaKnown RBP12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Ercc6lQ8BHK9 1240 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 AbraQ8BUZ1 375 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Slc5a1Q8C3K6 665 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Zfp202Q8C879 641 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Tmc2Q8R4P4 888 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Lrrc2Q8VDB8 371 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Trim59Q922Y2 403 aa12.13□□□□□ -0.47
Tro-201ENSMUST00000087253 Itga6Q61739 1091 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Spag5Q7TME2 1165 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Srek1Q8BZX4 494 aaKnown RBP12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Mei1Q9D4I2 1268 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 CtcfQ61164 736 aaKnown RBP12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Acnat2Q8BGG9 420 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Pnpla2Q8BJ56 486 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Smim5Q8BT42 78 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Ttc19Q8CC21 365 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Gnl2Q99LH1 728 aaKnown RBP12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Tbc1d7Q9D0K0 293 aa12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Tcof1O08784 1320 aaKnown RBP12.12□□□□□ -0.47
Tro-201ENSMUST00000087253 Prl3d3A0A0M6L0J6 224 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Cplx1P63040 134 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Mcm6P97311 821 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Larp6Q8BN59 492 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Krt25Q8VCW2 446 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Zeb2Q9R0G7 1215 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Acot9Q9R0X4 439 aaKnown RBP12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 IncenpQ9WU62 880 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Large1Q9Z1M7 756 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Usp42B2RQC2 1324 aaKnown RBP12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Slc1a4O35874 532 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Uri1Q3TLD5 531 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Fam170aQ66LM6 333 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Panx2Q6IMP4 677 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Ddx58Q6Q899 926 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Atad2Q8CDM1 1040 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Ints4Q8CIM8 964 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Ehd4Q9EQP2 541 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Nhsl1Q8CAF4 1587 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Actn3O88990 900 aaKnown RBP12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 LtkP08923 888 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Pfkfb1P70266 471 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Prpf4bQ61136 1007 aaKnown RBP12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Cep55Q8BT07 462 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Nop2Q922K7 793 aaKnown RBP12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Rbm33Q9CXK9 1231 aaKnown RBP12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Naa16Q9DBB4 864 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Cdc45Q9Z1X9 566 aa12.11□□□□□ -0.47
Tro-201ENSMUST00000087253 Diaph1O08808 1255 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 Prdm1Q60636 856 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 NfkbibQ60778 359 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 Drc7Q6V3W6 876 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 Arl8aQ8VEH3 186 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 Jakmip2D3YXK0 820 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 AK157302I3ITR1 129 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 Mns1Q61884 491 aa12.1□□□□□ -0.47
Tro-201ENSMUST00000087253 Atg9aQ68FE2 551 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms