RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Nup160Q9Z0W3 1402 aaKnown RBP11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Gm7347D3YYI9 267 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Wdr93Q402B2 695 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Nop2Q922K7 793 aaKnown RBP11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Sh2b1Q91ZM2 756 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Atad3Q925I1 591 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rimbp2Q80U40 1072 aa11.77□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ccdc186Q8C9S4 917 aa11.77□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ccdc189Q6NZQ0 333 aa11.77□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Pcdhb22Q91XZ8 794 aa11.77□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Atp2a1Q8R429 994 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Fam114a2Q8VE88 497 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ubxn1Q922Y1 297 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ebag9Q9D0V7 213 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 PcQ05920 1178 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Pabpn1lQ5XFR0 273 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Tbc1d31Q6NXY1 996 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Snx13Q6PHS6 957 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Rusc2Q80U22 1514 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Acot9Q9R0X4 439 aaKnown RBP11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Snapc4Q8BP86 1333 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Bin1O08539 588 aaKnown RBP11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ano9P86044 747 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ift20Q61025 132 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Bicdl2Q8CHW5 507 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Rsrc1Q9DBU6 334 aa11.77□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Zc3h12cQ5DTV4 884 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cplx4Q80WM3 160 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ginm1Q91WR6 327 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Atp6v0a2P15920 856 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Kif5cP28738 956 aaKnown RBP11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 DymQ8CHY3 669 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Sec63Q8VHE0 760 aaKnown RBP11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Vps16Q920Q4 839 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Chd1lQ9CXF7 900 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Camk4P08414 469 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Olfm5Q8BU90 496 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Serpinb6bO08804 377 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Smarcc2Q6PDG5 1213 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Fsip1Q9D3V5 435 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Clec11aO88200 328 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Vps37cQ8R105 352 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Tmem143Q8VD26 458 aa11.76□□□□□ -0.53
Scn8a-201ENSMUST00000082209 LdhaP06151 332 aaKnown RBP11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Nsd3Q6P2L6 1439 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Nsfl1cQ9CZ44 370 aaKnown RBP11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Gm5934D3Z4U6 212 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ltv1Q6NSQ7 470 aaKnown RBP11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Matr3Q8K310 846 aaKnown RBP11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Slc38a10Q5I012 1090 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cib2Q9Z309 187 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Stx8O88983 236 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Osbpl5Q9ER64 874 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Atp6v0a4Q920R6 833 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Disp1Q3TDN0 1521 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ccdc6D3YZP9 469 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ccdc89Q9DA73 370 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 A0A1W2P7S8 802 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cdc5lQ6A068 802 aaKnown RBP11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Hexim1Q8R409 356 aaKnown RBP11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 NsmfQ99NF2 532 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 4930548H24RikQ9D496 437 aa11.75□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ranbp6Q8BIV3 1105 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Bfsp1A2AMT1 669 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Slc4a4O88343 1079 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 EsrrbQ61539 433 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ubn2Q80WC1 1314 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 FanclQ9CR14 375 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 CebpzP53569 1052 aaKnown RBP11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 FerP70451 823 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Smarcad1Q04692 1021 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Trim6Q8BGE7 488 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Rps6kb1Q8BSK8 525 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cfap57Q9D180 1249 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Gbp7Q91Z40 638 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ercc3P49135 783 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Zfp251Q6PCX8 632 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Slc17a8Q8BFU8 601 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Lonp1Q8CGK3 949 aaKnown RBP11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Mxra7Q9CZH7 178 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Krt13P08730 437 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Mcm7Q61881 719 aaKnown RBP11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Sec62Q8BU14 398 aaKnown RBP11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Slc5a4bQ91ZP4 660 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Actn2Q9JI91 894 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Liat1Q810M6 228 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cyp2ab1S4R196 498 aa11.74□□□□□ -0.53
Scn8a-201ENSMUST00000082209 SlmapQ3URD3 845 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Nek5Q7TSC3 627 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Klhl20Q8VCK5 604 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Mis12Q9CY25 206 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Asic1Q6NXK8 526 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Mcur1Q9CXD6 340 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 JmyQ9QXM1 983 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Prl3d2F6R3P9 224 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Slc27a3O88561 667 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Tmed8Q3UHI4 326 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ccdc113Q8C5T8 377 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Swap70Q6A028 585 aaKnown RBP11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 GptQ8QZR5 496 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms