RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Sptlc3Q8BG54 563 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Samm50Q8BGH2 469 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Map10Q8BJS7 891 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 NaspQ99MD9 773 aaKnown RBP13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Sept12Q9D451 317 aa13.26□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Scp2P32020 547 aaKnown RBP13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 CgnP59242 1191 aa13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Atl2Q6PA06 583 aa13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Emilin1Q99K41 1017 aa13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Kat6bQ8BRB7 1872 aa13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Fkbp1aP26883 108 aaKnown RBP13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Cct2P80314 535 aaKnown RBP13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ppp1r10Q80W00 888 aaKnown RBP13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Glipr1l2Q9CQ35 332 aa13.25□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ankrd31A0A140LI88 1765 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Pde8bE9Q4S1 865 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Cd22P35329 862 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Cnnm3Q32NY4 713 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Fam160b2Q80YR2 744 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Zfp113Q8C689 439 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ccdc178Q8CDV0 866 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Cep57l1Q8VDS7 400 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 ZwintQ9CQU5 252 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Tbc1d7Q9D0K0 293 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Greb1lB9EJV3 1913 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Usp42B2RQC2 1324 aaKnown RBP13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Cyp2d34L7N463 504 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Gm21985Q6P6P5 1106 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Pms1Q8K119 917 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Slc5a4bQ91ZP4 660 aa13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ppil4Q9CXG3 492 aaKnown RBP13.24□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Aox1O54754 1333 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Edrf1Q6GQV7 1239 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 NgdnQ9DB96 315 aaKnown RBP13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Usp35M0QWN7 1009 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Slc38a10Q5I012 1090 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Leo1Q5XJE5 667 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Casc1Q6TDU8 730 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Sgsm1Q8BPQ7 1093 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Klf15Q9EPW2 415 aa13.23□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Sept1P42209 366 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ift57Q8BXG3 429 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Phc3Q8CHP6 981 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ppp4r3bQ922R5 820 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Popdc2Q9ES82 367 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Ube2hP62257 183 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Nap1l3Q794H2 544 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Shisa4Q8CA71 197 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Appbp2Q9DAX9 585 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Kcnq5Q9JK45 933 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Mapk8ip1Q9WVI9 707 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Kndc1Q0KK55 1742 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Col22a1E9Q7P1 1613 aa13.22□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Fsd1Q7TPM6 496 aa13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Plekho1Q9JIY0 408 aa13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Golgb1E9PVZ8 3238 aa13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Pram1Q6BCL1 675 aa13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Nxf7Q80SZ6 620 aaKnown RBP13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Lmod1Q8BVA4 595 aa13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 PdiltQ9DAN1 588 aa13.21□□□□□ -0.29
Ddx55-201ENSMUST00000071057 Fbxl16A2RT62 479 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Klhl33G3UW92 533 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Cyp2d9P11714 504 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Snrpa1P57784 255 aaKnown RBP13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Smarcc1P97496 1104 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Anp32eP97822 260 aaKnown RBP13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ubash3aQ3V3E1 624 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Pla2g4fQ50L41 855 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Fbxw10Q5SUS0 1030 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ifit1Q64282 463 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ano1Q8BHY3 960 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Vps53Q8CCB4 832 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Tubb6Q922F4 447 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Gm29094F6Q785 221 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Mcm3P25206 812 aaKnown RBP13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Exosc10P56960 887 aaKnown RBP13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Plbd2Q3TCN2 594 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Esyt1Q3U7R1 1092 aaKnown RBP13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 AmotQ8VHG2 1126 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 MthfsQ9D110 203 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Chaf1aQ9QWF0 911 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 4931408C20RikE9PWP9 1381 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Prl3d1P18121 224 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Plekhf1Q3TB82 279 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Wdr24Q8CFJ9 790 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Riok1Q922Q2 567 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Dydc1Q9D9T0 175 aa13.2□□□□□ -0.3
Ddx55-201ENSMUST00000071057 HalP35492 657 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Rhbdl3P58873 404 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Fam71bQ5STT6 665 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Mybpc2Q5XKE0 1136 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Fez2Q6TYB5 348 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Atad2Q8CDM1 1040 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Nup88Q8CEC0 753 aaKnown RBP13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ube3bQ9ES34 1070 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Plagl1Q9JLQ4 704 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Nhsl1Q8CAF4 1587 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Cacna1sQ02789 1880 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Zc3h12cQ5DTV4 884 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Zscan22Q8BGS5 496 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms