RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Zfp202Q8C879 641 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 IncenpQ9WU62 880 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Brwd3A2AHJ4 1799 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 ItpripQ3TNL8 555 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Zkscan8Q8BSL0 588 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Rdm1Q9CQK3 281 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Cap2Q9CYT6 476 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ccdc39Q9D5Y1 937 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Map2P20357 1828 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Dync1i1O88485 628 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Rrp1P56183 494 aaKnown RBP11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Smc2Q8CG48 1191 aaKnown RBP11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ifi35Q9D8C4 286 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Nom1Q3UFM5 854 aaKnown RBP11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Baiap2l1Q9DBJ3 514 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Rims2Q9EQZ7 1530 aa11.22□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Gm45140A0A0N4SUM8 220 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Sdc2P43407 202 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ehd2Q8BH64 543 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Klhl30Q8C3F7 581 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Trim11Q99PQ2 467 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Rapgef4Q9EQZ6 1011 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Diaph1O08808 1255 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Kcnj4P52189 445 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Fam43aQ8BUP8 424 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Mb21d2Q8C525 428 aa11.21□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Bicdl1A0JNT9 577 aa11.21□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Zscan20B2KFW1 1030 aa11.21□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Psmb7P70195 277 aa11.21□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Maats1Q8BRC6 783 aa11.21□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ccz1Q8C1Y8 480 aa11.21□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 9230110C19RikQ8CC70 267 aa11.21□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Eva1cP58659 440 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 TfrcQ62351 763 aaKnown RBP11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nlrp9bQ66X22 1003 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 C3P01027 1663 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Chd2E9PZM4 1827 aaKnown RBP11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Arid4aF8VPQ2 1261 aaKnown RBP11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Hap1O35668 628 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Gm12185Q5NCB2 835 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Trim34aQ99PP6 485 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Med1Q925J9 1575 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Pet2A2AHY8 747 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Gcom1E9PZ54 550 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 GmnnO88513 206 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 MyzapQ3UIJ9 466 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 NfkbibQ60778 359 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Dnaaf2Q8BPI1 814 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ncaph2Q8BSP2 607 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Bmp2kQ91Z96 1138 aa11.2□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Map7d2A2AG50 781 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 MpndQ3TV65 487 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Sf3b2Q3UJB0 878 aaKnown RBP11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ccdc150Q8CDI7 1110 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Golph3lQ8R088 285 aaKnown RBP11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 4930548H24RikQ9D496 437 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Dusp10Q9ESS0 483 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 N4bp2F8VQG7 1678 aaKnown RBP11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Pfkfb1P70266 471 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Brinp3Q499E0 766 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Slf2Q6P9P0 1278 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Sec62Q8BU14 398 aaKnown RBP11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Kcnj14Q8JZN3 434 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Rbm33Q9CXK9 1231 aaKnown RBP11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Myo1bP46735 1107 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Pex1Q5BL07 1284 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Tpcn2Q8BWC0 731 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Zswim4Q8C7B8 1101 aa11.19□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Prl3d2F6R3P9 224 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 TsksO54887 585 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 SfswapQ3USH5 945 aaKnown RBP11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Secisbp2lQ6A098 1086 aaKnown RBP11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Jmjd4Q8BFT6 427 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Pnpla2Q8BJ56 486 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Plcd3Q8K2J0 785 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ankrd1Q9CR42 319 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Myl3P09542 204 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nlrp1aQ2LKU9 1182 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ap5z1Q3U829 807 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Fam160b2Q80YR2 744 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Necab1Q8BG18 352 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Trim29Q8R2Q0 587 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Cops6O88545 324 aa11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ccdc12Q8R344 166 aaKnown RBP11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 NgdnQ9DB96 315 aaKnown RBP11.18□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nbr1P97432 988 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Exoc5Q3TPX4 708 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 CerkQ8K4Q7 531 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nop2Q922K7 793 aaKnown RBP11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Tab2Q99K90 693 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ltb4r2Q9JJL9 360 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ahnak2E9PYB0 1738 aaKnown RBP11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Rnf123Q5XPI3 1314 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 A0A1L1SQF0 893 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Tpm4Q6IRU2 248 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Acap3Q6NXL5 833 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Wdr3Q8BHB4 942 aaKnown RBP11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Appbp2Q9DAX9 585 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Mapk8ip1Q9WVI9 707 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Usp42B2RQC2 1324 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms