RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 HrQ61645 1182 aa11.37□□□□□ -0.59
Chd1-201ENSMUST00000024620 Lin7aQ8JZS0 233 aa11.37□□□□□ -0.59
Chd1-201ENSMUST00000024620 Cbx8Q9QXV1 362 aa11.37□□□□□ -0.59
Chd1-201ENSMUST00000024620 Znf541Q0GGX2 1363 aa11.37□□□□□ -0.59
Chd1-201ENSMUST00000024620 Abca9Q8K449 1623 aa11.37□□□□□ -0.59
Chd1-201ENSMUST00000024620 Arhgap31A6X8Z5 1425 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Cpsf2O35218 782 aaKnown RBP11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Tmem165P52875 323 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ppp1r7Q3UM45 361 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ddx11Q6AXC6 880 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Vps18Q8R307 973 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Gigyf1Q99MR1 1044 aaKnown RBP11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Col4a3bpQ9EQG9 624 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 NexmifQ5DTT1 1515 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Fgd6Q69ZL1 1399 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ccdc146E9Q9F7 977 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 ClppO88696 272 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Mum1Q6DID5 682 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Spice1Q8C804 860 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Frat2Q8K025 231 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Tmem221Q8K071 230 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ablim1Q8K4G5 861 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Zcrb1Q9CZ96 217 aaKnown RBP11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Sapcd2Q9D818 391 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Kdm5aQ3UXZ9 1690 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Itga9B8JK39 1036 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Epas1P97481 874 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Smarcc1P97496 1104 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ncoa7Q6DFV7 943 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Thoc1Q8R3N6 657 aaKnown RBP11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Map3k20Q9ESL4 802 aaKnown RBP11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Sel1lQ9Z2G6 790 aa11.36□□□□□ -0.59
Chd1-201ENSMUST00000024620 Maml3D4QGC2 1135 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Cdr2P97817 455 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Hif1aQ61221 836 aaKnown RBP11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Trim37Q6PCX9 961 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 HnrnpuQ8VEK3 800 aaKnown RBP11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Snx1Q9WV80 522 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Nup160Q9Z0W3 1402 aaKnown RBP11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 EsrrbQ61539 433 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Maco1Q7TQE6 664 aaKnown RBP11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Aldh1l2Q8K009 923 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 Aox4Q3TYQ9 1336 aa11.35□□□□□ -0.59
Chd1-201ENSMUST00000024620 EmbP21995 330 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Tdo2P48776 406 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Tmem232Q5K6N0 675 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Utp18Q5SSI6 552 aaKnown RBP11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 PsapQ61207 557 aaKnown RBP11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Gbp9Q8BTS3 619 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Cc2d2bA0A286YDU8 1405 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 ErbinQ80TH2 1402 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Clec11aO88200 328 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Cyp2c37P56654 490 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 CgnP59242 1191 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Wdr35Q8BND3 1181 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Slc39a13Q8BZH0 361 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Zbtb8bQ8CII0 484 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Mmtag2Q99LX5 260 aaKnown RBP11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ttc30a2A2AKQ8 664 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 IntuQ059U7 942 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Nol8Q3UHX0 1147 aaKnown RBP11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Pacs2Q3V3Q7 862 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Rasa3Q60790 834 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Lamc2Q61092 1191 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Zkscan8Q8BSL0 588 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Krt222Q8CCX5 294 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ccdc158Q8CDI6 1109 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Matr3Q8K310 846 aaKnown RBP11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Terf2ipQ91VL8 393 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ttc30a1Q99J38 664 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Ttc30bQ9CY00 664 aa11.34□□□□□ -0.59
Chd1-201ENSMUST00000024620 Itsn2Q9Z0R6 1659 aa11.33□□□□□ -0.59
Chd1-201ENSMUST00000024620 Usp31E9Q6Y8 1344 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Adgrl1Q80TR1 1466 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Myo1aO88329 1043 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Eif4g2Q62448 906 aaKnown RBP11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 LgsnQ8CIX8 563 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Prpf6Q91YR7 941 aaKnown RBP11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Armc9Q9D2I5 817 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Stx6Q9JKK1 255 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Ddx25Q9QY15 484 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Gm3409A0A0G2JE67 319 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Pdap1Q3UHX2 181 aaKnown RBP11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 ItgadQ3V0T4 1168 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Zpr1Q62384 459 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Arl13bQ640N2 427 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Abcf1Q6P542 837 aaKnown RBP11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 March6Q6ZQ89 909 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 3830417A13RikQ8BQJ2 303 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Card14Q99KF0 999 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Lztr1Q9CQ33 837 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 TnmdQ9EP64 317 aa11.33□□□□□ -0.6
Chd1-201ENSMUST00000024620 Ksr2Q3UVC0 959 aa11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 Kif22Q3V300 660 aa11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 ChpfQ6IQX7 774 aa11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 Sdad1Q80UZ2 687 aaKnown RBP11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 Ankrd24Q80VM7 985 aa11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 Iffo1Q8BXL9 562 aa11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 Birc3O08863 600 aa11.32□□□□□ -0.6
Chd1-201ENSMUST00000024620 Trim27Q62158 513 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms