RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ehbp1Q69ZW3 1231 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Mcm6P97311 821 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ppp1r21Q3TDD9 780 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 P4ha1Q60715 534 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tubb2aQ7TMM9 445 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Rbm19Q8R3C6 952 aaKnown RBP12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tubb2bQ9CWF2 445 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Klhl10Q9D5V2 608 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 DonsonQ9QXP4 560 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Abca6Q8K441 1624 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Rbbp8nlA2ABX0 614 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Aifm3Q3TY86 605 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ppp4r3aQ6P2K6 820 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Kdm3aQ6PCM1 1323 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Iqsec2Q5DU25 1478 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Trak2Q6P9N8 913 aa12.23□□□□□ -0.45
Ciita-201ENSMUST00000023147 Grm8P47743 908 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Kiaa1211Q5PR69 1207 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Cep120Q7TSG1 988 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tmem87aQ8BXN9 555 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ano2Q8CFW1 1002 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ccdc12Q8R344 166 aaKnown RBP12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Kif2cQ922S8 721 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Cdc42bpbQ7TT50 1713 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 NpcdF8VQB8 469 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Frat1P70339 274 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tmem266Q8BZB3 538 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tpx2A2APB8 745 aaKnown RBP12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Bin1O08539 588 aaKnown RBP12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 FanccP50652 591 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 CalcaP70160 136 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Specc1lQ2KN98 1118 aaKnown RBP12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Brd2Q7JJ13 798 aaKnown RBP12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tmem132aQ922P8 1018 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Dph6Q9CQ28 267 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Tldc2A2ACG1 198 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Dapk3O54784 448 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ccdc114Q3UX62 658 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 Gbp2Q9Z0E6 589 aa12.22□□□□□ -0.45
Ciita-201ENSMUST00000023147 MaddQ80U28 1577 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Sptlc2P97363 560 aaKnown RBP12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Smarcc1P97496 1104 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ncf1Q09014 390 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Fam107bQ3TGF2 131 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ccdc122Q8BVN0 290 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Gys2Q8VCB3 704 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 CactinQ9CS00 772 aaKnown RBP12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Ssrp1Q08943 708 aaKnown RBP12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Skap1Q3UUV5 355 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Vps37cQ8R105 352 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Setdb1O88974 1307 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Kif24Q6NWW5 1356 aa12.21□□□□□ -0.45
Ciita-201ENSMUST00000023147 Arl1P61211 181 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 Sec62Q8BU14 398 aaKnown RBP12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 EngaseQ8BX80 734 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 Mxra7Q9CZH7 178 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 Dmrtc1Q9D9R7 182 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tmem94Q7TSH8 1360 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 VeztQ3ZK22 780 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 Haus2Q9CQS9 234 aa12.21□□□□□ -0.46
Ciita-201ENSMUST00000023147 U2af1l4Q8BGJ9 220 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tpd52l2Q9CYZ2 220 aaKnown RBP12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Fam50bQ9WTJ8 334 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Znf541Q0GGX2 1363 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Gm9992B2RWK3 458 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ankle2Q6P1H6 964 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Unc93aQ710D3 458 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Yeats4Q9CR11 227 aaKnown RBP12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Setd1bQ8CFT2 1985 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Klhl30Q8C3F7 581 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Wdr24Q8CFJ9 790 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Zbtb3Q91X45 518 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ddx27Q921N6 760 aaKnown RBP12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tbc1d7Q9D0K0 293 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Pus7B7ZNL8 666 aaKnown RBP12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Atp2a2O55143 1044 aaKnown RBP12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Mpp4Q6P7F1 635 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Rdm1Q9CQK3 281 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Syap1Q9D5V6 365 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Taf7Q9R1C0 341 aa12.2□□□□□ -0.46
Ciita-201ENSMUST00000023147 Igsf1Q7TQA1 1317 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Speer4dL7N216 212 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Slf2Q6P9P0 1278 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Prpf31Q8CCF0 499 aaKnown RBP12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Gtpbp10Q8K013 366 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Krt25Q8VCW2 446 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Taf12Q8VE65 161 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 4930548H24RikQ9D496 437 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Zscan29E9Q5B4 869 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Stx8O88983 236 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tshz1Q5DTH5 1084 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Sgsm2Q80U12 1005 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Pnpla2Q8BJ56 486 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 NsmfQ99NF2 532 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Homer2Q9QWW1 354 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 IqceQ6PCQ0 778 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Slc5a1Q8C3K6 665 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Slc14a2Q8R4T9 930 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Farp2Q91VS8 1065 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Hip1rQ9JKY5 1068 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms