RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CFAP47Q6ZTR5 3102 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 KRBOX1C9JBD0 128 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 LRP3O75074 770 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 DEDDO75618 318 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 IDH3GP51553 393 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-229ENST00000641891 UCP3P55916 312 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 TBC1D28Q2M2D7 210 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 MPV17LQ2QL34 196 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 LIAT1Q6ZQX7 453 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 DPPA2Q7Z7J5 298 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 GLYATL2Q8WU03 294 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 MSI2Q96DH6 328 aaKnown RBP14.49□□□□□ -0.09
PHGDH-229ENST00000641891 POM121Q96HA1 1249 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 TP53RKQ96S44 253 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 DNAJB11Q9UBS4 358 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 PCDHB10Q9UN67 800 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 MPC1Q9Y5U8 109 aa14.49□□□□□ -0.09
PHGDH-229ENST00000641891 DMXL1Q9Y485 3027 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 A0A1B0GW55 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 HS3ST1O14792 307 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 PHF1O43189 567 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-229ENST00000641891 IGHG3P01860 377 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4L2P0CJ85 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4L3P0CJ86 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4L4P0CJ87 422 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4L5P0CJ88 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4L6P0CJ89 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4L7P0CJ90 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 GNG3P63215 75 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 NAAAQ02083 359 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 SPERTQ8NA61 448 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 SUMF2Q8NBJ7 301 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 C18orf12Q96KH6 178 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 GPHA2Q96T91 129 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 ZC4H2Q9NQZ6 224 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 DUX4Q9UBX2 424 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 LHX6Q9UPM6 363 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 ESPL1Q14674 2120 aa14.48□□□□□ -0.09
PHGDH-229ENST00000641891 URB1O60287 2271 aaKnown RBP14.48□□□□□ -0.09
PHGDH-229ENST00000641891 RCC1P18754 421 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-229ENST00000641891 RPL7L1Q6DKI1 246 aaKnown RBP14.47□□□□□ -0.09
PHGDH-229ENST00000641891 C20orf204Q6ZNR8 217 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 WDR86Q86TI4 376 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 ZNF573Q86YE8 665 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 RDH5Q92781 318 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 SUCNR1Q9BXA5 334 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 OR2J1Q9GZK6 312 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 OR51I2Q9H344 312 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 IGKV1-6A0A0C4DH72 117 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 IGHV3-64DA0A0J9YX35 117 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 OR5B21A6NL26 309 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 FGF16O43320 207 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 SMPD2O60906 423 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 DIRAS3O95661 229 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 MBPP02686 304 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-229ENST00000641891 HOXD4P09016 255 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-229ENST00000641891 GNRHRP30968 328 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 ALKBH6Q3KRA9 238 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 MEX3BQ6ZN04 569 aaKnown RBP14.47□□□□□ -0.09
PHGDH-229ENST00000641891 Q6ZS49 121 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 CNEP1R1Q8N9A8 125 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 SECTM1Q8WVN6 248 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 FAM86C1Q9NVL1 165 aa14.47□□□□□ -0.09
PHGDH-229ENST00000641891 TRAV24A0A0B4J272 114 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 IGKV1D-13A0A0B4J2D9 117 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 IGKV1-13P0DP09 117 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 RPL12P30050 165 aaKnown RBP14.46□□□□□ -0.09
PHGDH-229ENST00000641891 UBE2NP61088 152 aaKnown RBP14.46□□□□□ -0.09
PHGDH-229ENST00000641891 PPP1CBP62140 327 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 DEFB109BQ30KR1 87 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 CLEC9AQ6UXN8 241 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 FAM58AQ8N1B3 248 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 OR52M1Q8NGK5 317 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 ARID1AO14497 2285 aa14.46□□□□□ -0.09
PHGDH-229ENST00000641891 H7C1Q1 480 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 K7EPK0 472 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 M6PRP20645 277 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 IL24Q13007 206 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 SMCO1Q147U7 214 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 IGFL2Q6UWQ7 119 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 FAM214BQ7L5A3 538 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 FAM71E2Q8N5Q1 922 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 LRTM2Q8N967 370 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 BPIFCQ8NFQ6 507 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 MRPL30Q8TCC3 161 aaKnown RBP14.46□□□□□ -0.1
PHGDH-229ENST00000641891 PRRX2Q99811 253 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 SYT3Q9BQG1 590 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 SMIM3Q9BZL3 60 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 DNTTIP1Q9H147 329 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 PLSCR2Q9NRY7 297 aa14.46□□□□□ -0.1
PHGDH-229ENST00000641891 B8ZZF3 427 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 MPPED1O15442 326 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 VWA1Q6PCB0 445 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF818PQ6ZRF7 136 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 LGI3Q8N145 548 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 SLC35G3Q8N808 338 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 CCDC71LQ8N9Z2 235 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 C9orf106Q8NAJ2 232 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 BSCL2Q96G97 398 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-229ENST00000641891 CDH20Q9HBT6 801 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms