RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 IDNKQ5T6J7 187 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 NDNFQ8TB73 568 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 SLC25A46Q96AG3 418 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 TM2D1Q9BX74 207 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 SHARPINQ9H0F6 387 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 OR5V1Q9UGF6 321 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 RAB22AQ9UL26 194 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 NIPBLQ6KC79 2804 aaeCLIP13.25□□□□□ -0.29
CLN6-216ENST00000636876 LOC105371242A0A075B767 164 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 TRAV20A0A0B4J274 112 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 C22orf46C9J442 243 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 CD5LO43866 347 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 ECDO95905 644 aaPredicted RBP13.25□□□□□ -0.29
CLN6-216ENST00000636876 PAHP00439 452 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 TGFAP01135 160 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 SNRPBP14678 240 aaKnown RBP13.25□□□□□ -0.29
CLN6-216ENST00000636876 PAX2Q02962 417 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 PLA2G7Q13093 441 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 SPCS2Q15005 226 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 GRK1Q15835 563 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 PAN3Q58A45 887 aaKnown RBP13.25□□□□□ -0.29
CLN6-216ENST00000636876 CD276Q5ZPR3 534 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 BTN2A1Q7KYR7 527 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 OR4S1Q8NGB4 309 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 OR5D13Q8NGL4 314 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 PPP1R35Q8TAP8 253 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 URM1Q9BTM9 101 aaKnown RBP13.25□□□□□ -0.29
CLN6-216ENST00000636876 BARHL1Q9BZE3 327 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 CHST6Q9GZX3 395 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 RBM38Q9H0Z9 239 aaKnown RBP13.25□□□□□ -0.29
CLN6-216ENST00000636876 LPAR5Q9H1C0 372 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 PPA2Q9H2U2 334 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 SPACA1Q9HBV2 294 aa13.25□□□□□ -0.29
CLN6-216ENST00000636876 PPIAL4CA0A0B4J2A2 164 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 H3BMQ9 156 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 MGST3O14880 152 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 RAB6AP20340 208 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 EFNB2P52799 333 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 DVL1P1P54792 670 aaPredicted RBP13.24□□□□□ -0.29
CLN6-216ENST00000636876 SCAND1P57086 179 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 KRTAP21-3Q3LHN1 58 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 ATAD3CQ5T2N8 411 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 SIGIRRQ6IA17 410 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 METAP1DQ6UB28 335 aaPredicted RBP13.24□□□□□ -0.29
CLN6-216ENST00000636876 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 GLCCI1Q86VQ1 547 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 SUMF2Q8NBJ7 301 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 LGALS14Q8TCE9 139 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 H1FXQ92522 213 aaKnown RBP13.24□□□□□ -0.29
CLN6-216ENST00000636876 PTX4Q96A99 478 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 DACT3Q96B18 629 aaPredicted RBP13.24□□□□□ -0.29
CLN6-216ENST00000636876 TMEM186Q96B77 213 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 SMR3AQ99954 134 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 NICN1Q9BSH3 213 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 DCTN5Q9BTE1 182 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 MRI1Q9BV20 369 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 HIF1ANQ9NWT6 349 aa13.24□□□□□ -0.29
CLN6-216ENST00000636876 RCC2Q9P258 522 aaKnown RBP13.24□□□□□ -0.29
CLN6-216ENST00000636876 RPUSD1Q9UJJ7 312 aaKnown RBP13.24□□□□□ -0.29
CLN6-216ENST00000636876 TRBV23-1A0A0A0MS06 115 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 A0A0A6YYD4 124 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 IGHV2-70DA0A0C4DH43 119 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 CCDC160A6NGH7 325 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 H3BUI4 141 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 HSPB6O14558 160 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 ENSAO43768 121 aaKnown RBP13.23□□□□□ -0.29
CLN6-216ENST00000636876 PDCD6O75340 191 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 LY6G6DO95868 133 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 CSN2P05814 226 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 FUT3P21217 361 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 GDPD3Q7L5L3 318 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 FAM89BQ8N5H3 189 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 C8orf46Q8TAG6 207 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 RAB40AQ8WXH6 277 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 NUDT16L1Q9BRJ7 211 aaKnown RBP13.23□□□□□ -0.29
CLN6-216ENST00000636876 DPCDQ9BVM2 203 aaPredicted RBP13.23□□□□□ -0.29
CLN6-216ENST00000636876 MMP26Q9NRE1 261 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 ETV7Q9Y603 341 aa13.23□□□□□ -0.29
CLN6-216ENST00000636876 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
CLN6-216ENST00000636876 SMIM31A0A1B0GVY4 71 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 GLAP06280 429 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 CHATP28329 748 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 KCNJ3P48549 501 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 RORCP51449 518 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 EDDM3AQ14507 147 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 DCAF12L2Q5VW00 463 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 RAB12Q6IQ22 244 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 LY6G5BQ8NDX9 201 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 OR5H6Q8NGV6 325 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
CLN6-216ENST00000636876 NEDD4LQ96PU5 975 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 PEX16Q9Y5Y5 336 aa13.22□□□□□ -0.29
CLN6-216ENST00000636876 HIVEP2P31629 2446 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 NSD1Q96L73 2696 aaPredicted RBP13.21□□□□□ -0.29
CLN6-216ENST00000636876 A0A0G2JMP0 313 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 A0A0X1KG70 313 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 KIR2DS1A0A191URI9 304 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 ZNF701M0R085 212 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms