RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SCAND1P57086 179 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 PAN3Q58A45 887 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 FOXB2Q5VYV0 432 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 CYB5R2Q6BCY4 276 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 FAM89BQ8N5H3 189 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 LINC01356Q8N9X3 169 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 H1FXQ92522 213 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 PTX4Q96A99 478 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 MSI2Q96DH6 328 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 POM121Q96HA1 1249 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 C18orf12Q96KH6 178 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 DPCDQ9BVM2 203 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 PPA2Q9H2U2 334 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 COMMD3Q9UBI1 195 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 PEX16Q9Y5Y5 336 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 ETV7Q9Y603 341 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
PCDHGC3-204ENST00000617222 LOC105371242A0A075B767 164 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 METTL21EPA6NDL7 271 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 A6NHS1 94 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 A8MXK9 166 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 GPR37O15354 613 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 INHBBP09529 407 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 CD99P14209 185 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 BLVRBP30043 206 aaPredicted RBP12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 RAB12Q6IQ22 244 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 GDPD3Q7L5L3 318 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 BIVMQ86UB2 503 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 OR8H2Q8N162 312 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 OR4M1Q8NGD0 313 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 OR56B1Q8NGI3 324 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 ACOT12Q8WYK0 555 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 AP3S1Q92572 193 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 DCUN1D5Q9BTE7 237 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 SPACA1Q9HBV2 294 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 ING3Q9NXR8 418 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 AKAP9Q99996 3911 aa12.94□□□□□ -0.34
PCDHGC3-204ENST00000617222 MAP1AP78559 2803 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 C22orf46C9J442 243 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 MCRIP1C9JLW8 97 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 H3BUI4 141 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 MGST3O14880 152 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 PDCD6O75340 191 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 ECDO95905 644 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 TGFAP01135 160 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 CHATP28329 748 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 TMEM50BP56557 158 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 EDDM3BP56851 147 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 EDDM3AQ14507 147 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 FAM189A2Q15884 450 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 CD276Q5ZPR3 534 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 MZT2AQ6P582 158 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 SAMD12Q8N8I0 201 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 SLC25A38Q96DW6 304 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 CYYR1Q96J86 154 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 DCTN5Q9BTE1 182 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 MMP26Q9NRE1 261 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 RHBDL2Q9NX52 303 aa12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 CCDC59Q9P031 241 aaKnown RBP12.93□□□□□ -0.34
PCDHGC3-204ENST00000617222 TEX15Q9BXT5 2789 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 RAB27BO00194 218 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 MSMBP08118 114 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 AESQ08117 197 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 DYNC1I2Q13409 638 aaKnown RBP12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 ATXN7L3Q14CW9 347 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 Q6ZTK2 550 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 C6orf201Q7Z4U5 140 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 RTN4RL2Q86UN3 420 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 CMTM4Q8IZR5 234 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 TPRX1Q8N7U7 411 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 OR10R2Q8NGX6 335 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 PLPPR1Q8TBJ4 325 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 RAB40AQ8WXH6 277 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 PLEKHJ1Q9NW61 149 aa12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 RPUSD1Q9UJJ7 312 aaKnown RBP12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC3-204ENST00000617222 FOXI3A8MTJ6 420 aaPredicted RBP12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 CSN2P05814 226 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 GLAP06280 429 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 FOSL1P15407 271 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 ZNF16P17020 682 aaPredicted RBP12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 GLIPR1P48060 266 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 KCNJ3P48549 501 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 RPL31P62899 125 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 PAX2Q02962 417 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 RBM39Q14498 530 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 C11orf91Q3C1V1 193 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 PLAC9Q5JTB6 97 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms