RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 MRPS24Q96EL2 167 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 TAAR6Q96RI8 345 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 DDA1Q9BW61 102 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 RIMS4Q9H426 269 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 GPR27Q9NS67 375 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 CACNG5Q9UF02 275 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 HMSDA8MTL9 139 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 FCGR3BO75015 233 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ACTL6AO96019 429 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OPN1MWP04001 364 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 CTSDP07339 412 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OPN1MW2P0DN77 364 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OPN1MW3P0DN78 364 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 SLC25A6P12236 298 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 BTCP35070 178 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 RBM11P57052 281 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 TMEM33P57088 247 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 HES1Q14469 280 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF787Q6DD87 383 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 RBMXL3Q8N7X1 1067 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OR1K1Q8NGR3 316 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OR4F5Q8NH21 305 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 GUCD1Q96NT3 240 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OR4F4Q96R69 305 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 RNASEK-C17orf49H0YIS7 233 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ABCD4O14678 606 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 WISP1O95388 367 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 HTD2P86397 168 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 UNC119Q13432 240 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 CLPPQ16740 277 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 C2orf68Q2NKX9 166 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 HPSE2Q8WWQ2 592 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ASB13Q8WXK3 278 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 CXXC4Q9H2H0 198 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 CLEC18AA5D8T8 446 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 NKX2-6A6NCS4 301 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 M0R1X1 148 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 ZIC3O60481 467 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 F2RL1P55085 397 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 AESQ08117 197 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 OR2A2Q6IF42 318 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 TPRX1Q8N7U7 411 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 CLEC18CQ8NCF0 446 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 WNT5BQ9H1J7 359 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 PINLYPA6NC86 204 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 PRR19A6NJB7 356 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 MKRN2OSH3BPM6 223 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 RPL36A-HNRNPH2H7BZ11 118 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 ERVH48-1M5A8F1 160 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 CRHP06850 196 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 PSG2P11465 335 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 RPS23P62266 143 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 USF2Q15853 346 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 ANKRD55Q3KP44 614 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 TEX30Q5JUR7 227 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 STPG1Q5TH74 334 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 MOGAT3Q86VF5 341 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 NUP210Q8TEM1 1887 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 CFDP00746 253 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 MPGP29372 298 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 LIPGQ9Y5X9 500 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 BPTFQ12830 3046 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 A0A1W2PPE3 182 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 OR2C1O95371 312 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 HBE1P02100 147 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 SNCAP37840 140 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 HMGN3Q15651 99 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 PFDN5Q99471 154 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 MMP26Q9NRE1 261 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 SCTP09683 121 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 NPBWR2P48146 333 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 PSMB3P49720 205 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 FBXW9Q5XUX1 488 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 S1PR3Q99500 378 aa7.75□□□□□ -1.17
PDLIM5-222ENST00000615540 A0A0U1RQV5 110 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 PPYP01298 95 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 RBMS3Q6XE24 437 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 CISD2Q8N5K1 135 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF441Q8N8Z8 693 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 FADS6Q8N9I5 356 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 FAM131CQ96AQ9 280 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 RPUSD4Q96CM3 377 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 SLC2A9Q9NRM0 540 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 STRAPQ9Y3F4 350 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 METTL15P1P0C7V9 234 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 OR2B8PP59922 312 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 ENDOGQ14249 297 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 RTN4RL2Q86UN3 420 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 CCL17Q92583 94 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 EGLN1Q9GZT9 426 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 SMCO4Q9NRQ5 59 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 F12P00748 615 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 G6PCP35575 357 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 IGFBP7Q16270 282 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF826PQ6ZT77 177 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 CHRNA10Q9GZZ6 450 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF355PQ9NSJ1 428 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 DENND4CQ5VZ89 1909 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms