RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GPR135Q8IZ08 494 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PRR26Q8N8Z3 221 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5AU1Q8NGC0 362 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR2Y1Q8NGV0 311 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR6N2Q8NGY6 317 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR1P1Q8NH06 330 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 EEF1AKMT1Q8WVE0 214 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 GUCD1Q96NT3 240 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 IP6K3Q96PC2 410 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF471Q9BX82 626 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SDR39U1Q9NRG7 319 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM38BQ9NVV0 291 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5AC2Q9NZP5 309 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 UBE2QL1A1L167 161 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OVOL3O00110 214 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 GNG7O60262 68 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MPDU1O75352 247 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 C1RP00736 705 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 GASTP01350 101 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MT-ND4P03905 459 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC35G6P0C7Q6 338 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PGA3P0DJD8 388 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 GYPEP15421 78 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 BIDP55957 195 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 BACE1P56817 501 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 RPS23P62266 143 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 BAXQ07812 192 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 C1DQ13901 141 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PTGES3Q15185 160 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 C3AR1Q16581 482 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MARCH9Q86YJ5 346 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 GPD1LQ8N335 351 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 LRTM2Q8N967 370 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR11G2Q8NGC1 345 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR6T1Q8NGN1 323 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR10G9Q8NGN4 311 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 FAM151AQ8WW52 585 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 KIRREL1Q96J84 757 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 RBKSQ9H477 322 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 C5orf66Q9H5L9 145 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ENY2Q9NPA8 101 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SIGLEC8Q9NYZ4 499 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MRPL27Q9P0M9 148 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 COL4A6Q14031 1691 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 LOC285556D6RIA3 1793 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 NKX2-6A6NCS4 301 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM202A6NGA9 273 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF878C9JN71 531 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 GABRPO00591 440 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 PRYO14603 147 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 RBFOX2O43251 390 aaKnown RBP eCLIP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 GPX2P18283 190 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ELK1P19419 428 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 PSMB1P20618 241 aaKnown RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SNRPD1P62314 119 aaKnown RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 FZD5Q13467 585 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 KLF9Q13886 244 aaPredicted RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 CSRP2Q16527 193 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TBC1D28Q2M2D7 210 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC25A52Q3SY17 297 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM176BQ3YBM2 270 aaPredicted RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 PLK5Q496M5 336 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 METRNLQ641Q3 311 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 DTX1Q86Y01 620 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 DEFB123Q8N688 67 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 LINC01356Q8N9X3 169 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC30A7Q8NEW0 376 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4N2Q8NGD1 307 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5W2Q8NH69 310 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 LOXL4Q96JB6 756 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 Q96MF0 132 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 RCL1Q9Y2P8 373 aaKnown RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 NME7Q9Y5B8 376 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 PLXND1Q9Y4D7 1925 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 A0A087WWC5 75 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 IGKV6D-41A0A0C4DH26 115 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 FAM231BA6NCW3 169 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 OR6C6A6NF89 314 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 A8MT66 165 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 DCTN6O00399 190 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 CLDN11O75508 207 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 GRAP2O75791 330 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 GJB5O95377 273 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 C1orf105O95561 183 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 GPR75O95800 540 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SERPINA7P05543 415 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 LIMS3P0CW19 117 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 LIMS4P0CW20 117 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ACP2P11117 423 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC25A4P12235 298 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TPT1P13693 172 aaKnown RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 PGAM2P15259 253 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 EBPQ15125 230 aaKnown RBP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SRSF7Q16629 238 aaKnown RBP eCLIP4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 OR2T5Q6IEZ7 315 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms