RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 GSTK1Q9Y2Q3 226 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 TENM2Q9NT68 2774 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 A0A1W2PPI3 338 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 ODAMA1E959 279 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 LINC01548A6NM66 108 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 CYB5AP00167 134 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 SERPINA3P01011 423 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
USE1-208ENST00000600970 ANXA8P13928 327 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 NFYBP25208 207 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 HNF4GQ14541 408 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 SSX6Q7RTT6 188 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 FOXRED2Q8IWF2 684 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 ARHGAP24Q8N264 748 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 DRAM1Q8N682 238 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 YIPF7Q8N8F6 280 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 DNAAF1Q8NEP3 725 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 OR9G1Q8NH87 305 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 COQ2Q96H96 371 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 CLN6Q9NWW5 311 aa13.17□□□□□ -0.3
USE1-208ENST00000600970 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 ZNF729A6NN14 1252 aaPredicted RBP13.16□□□□□ -0.3
USE1-208ENST00000600970 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 CSN2P05814 226 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 CRISP1P54107 249 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 DIAPH2-AS1Q14236 149 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 ADGRG5Q8IZF4 528 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 CCDC54Q8NEL0 328 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 OR8U1Q8NH10 309 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 C10orf35Q96D05 121 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 KIRREL1Q96J84 757 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 RCHY1Q96PM5 261 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 ADI1Q9BV57 179 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 ING3Q9NXR8 418 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
USE1-208ENST00000600970 DNAH1Q9P2D7 4330 aa13.16□□□□□ -0.3
USE1-208ENST00000600970 LYSTQ99698 3801 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 LCE6AA0A183 80 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 B2RBV5 119 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 J3QR06 171 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 MNAT1P51948 309 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 MTCP1P56278 107 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 PDZK1IP1Q13113 114 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 PNLIPRP3Q17RR3 467 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 PP6455Q8WZ26 134 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 LRGUKQ96M69 825 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
USE1-208ENST00000600970 PPIL3Q9H2H8 161 aaKnown RBP13.15□□□□□ -0.3
USE1-208ENST00000600970 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
USE1-208ENST00000600970 IGKV1-12A0A0C4DH73 117 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 KBTBD11-OT1A0A1B0GTJ5 212 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 M0R129 80 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 IGKV1D-33P01593 117 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 IGKV1-33P01594 117 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 IGKV1D-12P01611 117 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 IGHV3-7P01780 117 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 KRT8P05787 483 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 LYL1P12980 280 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 ZNF44P15621 663 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 CDX1P47902 265 aaPredicted RBP13.14□□□□□ -0.31
USE1-208ENST00000600970 SCN1BQ07699 218 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 DOC2BQ14184 412 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 PTGES3Q15185 160 aaKnown RBP13.14□□□□□ -0.31
USE1-208ENST00000600970 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 NXNL2Q5VZ03 156 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 CANT1Q8WVQ1 401 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 LEAP2Q969E1 77 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 RFT1Q96AA3 541 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 ASB9Q96DX5 294 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 ADAT3Q96EY9 351 aaPredicted RBP13.14□□□□□ -0.31
USE1-208ENST00000600970 HRASLS5Q96KN8 279 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 TBX5Q99593 518 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 H2AFY2Q9P0M6 372 aaPredicted RBP13.14□□□□□ -0.31
USE1-208ENST00000600970 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
USE1-208ENST00000600970 AP4M1O00189 453 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 SLC33A1O00400 549 aaPredicted RBP13.13□□□□□ -0.31
USE1-208ENST00000600970 CGB3P0DN86 165 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 CGB7P0DN87 165 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 ATF1P18846 271 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 RAB7AP51149 207 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 EFNB1P98172 346 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 MADCAM1Q13477 382 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 ATXN7L3Q14CW9 347 aaPredicted RBP13.13□□□□□ -0.31
USE1-208ENST00000600970 ZNF260Q3ZCT1 412 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
USE1-208ENST00000600970 Q6P435 159 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 LHFPL2Q6ZUX7 228 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 OR8H3Q8N146 312 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 PRSS35Q8N3Z0 413 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 TCEANCQ8N8B7 351 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
USE1-208ENST00000600970 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
USE1-208ENST00000600970 METTL15A6NJ78 407 aa13.12□□□□□ -0.31
USE1-208ENST00000600970 KDM4BO94953 1096 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms