RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 C11orf42Q8N5U0 333 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 OR51A4Q8NGJ6 313 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 OR5D13Q8NGL4 314 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 LINC01006Q8NI28 216 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 RFT1Q96AA3 541 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 BORCS8Q96FH0 119 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 NOTCH1P46531 2555 aa11.21□□□□□ -0.62
SCAF1-203ENST00000598359 SERPINA3P01011 423 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 CD1AP06126 327 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 DUSP1P28562 367 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 CD40LGP29965 261 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 NPBWR2P48146 333 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 POU3F4P49335 361 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 DEFA6Q01524 100 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 LY6EQ16553 131 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 Q6ZSV7 163 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 EMG1Q92979 244 aaKnown RBP11.2□□□□□ -0.62
SCAF1-203ENST00000598359 PELI1Q96FA3 418 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 C4orf36Q96KX1 117 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 SPACA5Q96QH8 159 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 ISG20L2Q9H9L3 353 aaKnown RBP11.2□□□□□ -0.62
SCAF1-203ENST00000598359 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
SCAF1-203ENST00000598359 RBFOX1Q9NWB1 397 aaKnown RBP11.2□□□□□ -0.62
SCAF1-203ENST00000598359 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 VPREB3Q9UKI3 123 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 RNF114Q9Y508 228 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
SCAF1-203ENST00000598359 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
SCAF1-203ENST00000598359 A0A1B0GUS0 222 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 TMEM82A0PJX8 343 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 H3BUX3 64 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 K7N7A8 449 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 ZNF737O75373 536 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 ZNF20P17024 532 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 BCL3P20749 454 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 AZGP1P25311 298 aaKnown RBP11.19□□□□□ -0.62
SCAF1-203ENST00000598359 DLX6P56179 175 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 EDDM3BP56851 147 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 ACTA2P62736 377 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 ACTG2P63267 376 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 EDDM3AQ14507 147 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 CNN3Q15417 329 aaKnown RBP11.19□□□□□ -0.62
SCAF1-203ENST00000598359 TRAM1Q15629 374 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 TMEM244Q5VVB8 128 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 DHRS7BQ6IAN0 325 aaPredicted RBP11.19□□□□□ -0.62
SCAF1-203ENST00000598359 TPRX1Q8N7U7 411 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 ZSCAN4Q8NAM6 433 aaPredicted RBP11.19□□□□□ -0.62
SCAF1-203ENST00000598359 PP6455Q8WZ26 134 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 CHST6Q9GZX3 395 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 PPA2Q9H2U2 334 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 CMYA5Q8N3K9 4069 aa11.19□□□□□ -0.62
SCAF1-203ENST00000598359 OR4C45A6NMZ5 311 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 E9PI62 339 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 J3QRK9 145 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 CHRM2P08172 466 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 ATF1P18846 271 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 RPS19P39019 145 aaKnown RBP11.18□□□□□ -0.62
SCAF1-203ENST00000598359 RBP2P50120 134 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 PPP5CP53041 499 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 ATP1B3P54709 279 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 MTCP1P56278 107 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
SCAF1-203ENST00000598359 FABP5Q01469 135 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 ZNF45Q02386 682 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 PLA1AQ53H76 456 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 FDX2Q6P4F2 183 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 KCTD20Q7Z5Y7 419 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 ZNF676Q8N7Q3 588 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 CCDC54Q8NEL0 328 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 OR5D18Q8NGL1 313 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 OR13C3Q8NGS6 347 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 OR13C9Q8NGT0 318 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 RPS4Y2Q8TD47 263 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 SLC25A46Q96AG3 418 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 MRPL48Q96GC5 212 aaKnown RBP11.18□□□□□ -0.62
SCAF1-203ENST00000598359 SSX3Q99909 188 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 CITED1Q99966 193 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 BARHL1Q9BZE3 327 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 FAM234AQ9H0X4 552 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 HEXA-AS1Q9H8Q6 139 aa11.18□□□□□ -0.62
SCAF1-203ENST00000598359 VWFP04275 2813 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 A0A1B0GVG6 124 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 A0A1W2PPH5 198 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 GABRPO00591 440 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 OGG1O15527 345 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 SC5DO75845 299 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 HAND1O96004 215 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 ISG15P05161 165 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 PRKACAP17612 351 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 CELP19835 753 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 GABRR1P24046 479 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 RORCP51449 518 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 PROK1P58294 105 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms