RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FUT6P51993 359 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 MALLQ13021 153 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 HEPN1Q6WQI6 88 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 C5orf24Q7Z6I8 188 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 CALHM1Q8IU99 346 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 MOB3AQ96BX8 217 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 TP53RKQ96S44 253 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 SYT3Q9BQG1 590 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 ZNF587BE7ETH6 402 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 TRAPPC6AO75865 159 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 TCN2P20062 427 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 SRD5A2P31213 254 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 HERV-K104P61576 105 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 CLINT1Q14677 625 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 RARRES2Q99969 163 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 SIT1Q9Y3P8 196 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 FRYLO94915 3013 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 A0A1B0GW64 132 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 K7N7A8 449 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 ST8SIA3O43173 380 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 OR7C1O76099 320 aaPredicted RBP14.23□□□□□ -0.13
LIG1-206ENST00000594067 IFNA17P01571 189 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 IGHV3-9P01782 118 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 P04436 131 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 FBP1P09467 338 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 NPBWR2P48146 333 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 IL13RA2Q14627 380 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 KRTAP27-1Q3LI81 207 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 WIPI1Q5MNZ9 446 aaPredicted RBP14.23□□□□□ -0.13
LIG1-206ENST00000594067 SLC35G3Q8N808 338 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 GGACTQ9BVM4 153 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 PILRBQ9UKJ0 227 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 PUS1Q9Y606 427 aaKnown RBP eCLIP14.23□□□□□ -0.13
LIG1-206ENST00000594067 OR2C1O95371 312 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 RPS18P62269 152 aaKnown RBP14.23□□□□□ -0.13
LIG1-206ENST00000594067 OR10D3Q8NH80 312 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 SHANK1Q9Y566 2161 aa14.23□□□□□ -0.13
LIG1-206ENST00000594067 DNPH1O43598 174 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 EDN3P14138 238 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 FOLR3P41439 243 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 RBM11P57052 281 aaKnown RBP14.22□□□□□ -0.13
LIG1-206ENST00000594067 SOHLH1Q5JUK2 328 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 TMEM182Q6ZP80 229 aaPredicted RBP14.22□□□□□ -0.13
LIG1-206ENST00000594067 FAM213BQ8TBF2 198 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 HOXA5P20719 270 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 SLC25A26Q70HW3 274 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 ZNF611Q8N823 705 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 LFNGQ8NES3 379 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 TOLLIPQ9H0E2 274 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 GPR35Q9HC97 309 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 RFNGQ9Y644 331 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 DMDP11532 3685 aa14.22□□□□□ -0.13
LIG1-206ENST00000594067 YIF1AO95070 293 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 F10P00742 488 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 PPYP01298 95 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 CCL20P78556 96 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 DAZAP2Q15038 168 aaPredicted RBP14.21□□□□□ -0.13
LIG1-206ENST00000594067 PMS2CLQ68D20 193 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 CCDC71LQ8N9Z2 235 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 SUMF1Q8NBK3 374 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 KCNE4Q8WWG9 221 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 ZNF845Q96IR2 970 aaPredicted RBP14.21□□□□□ -0.13
LIG1-206ENST00000594067 PAPOLGQ9BWT3 736 aaKnown RBP14.21□□□□□ -0.13
LIG1-206ENST00000594067 IL36GQ9NZH8 169 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 KIAA1549Q9HCM3 1950 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 ZNF816-ZNF321PA0A0X1KG74 233 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 NKX2-6A6NCS4 301 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 IFITM10A6NMD0 228 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 FUT3P21217 361 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 OTX2P32243 289 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 UCP3P55916 312 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 CLDN15P56746 228 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 ZNF100Q8IYN0 542 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 SUMF2Q8NBJ7 301 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 OR4D5Q8NGN0 318 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 OR2V1Q8NHB1 315 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 ABHD3Q8WU67 409 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 MUCL1Q96DR8 90 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 SGCZQ96LD1 299 aa14.21□□□□□ -0.13
LIG1-206ENST00000594067 C3orf85A0A1B0GTC6 90 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 FAM24AA6NFZ4 105 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 PATE3B3GLJ2 98 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 GPR37O15354 613 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 OR8B8Q15620 311 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 TMEM211Q6ICI0 200 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 SLC23A3Q6PIS1 610 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 GPHA2Q96T91 129 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 SMDT1Q9H4I9 107 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 TMED3Q9Y3Q3 217 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 FREM2Q5SZK8 3169 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 MPPED1O15442 326 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 GATCO43716 136 aaKnown RBP14.2□□□□□ -0.14
LIG1-206ENST00000594067 RPS10P46783 165 aaKnown RBP14.2□□□□□ -0.14
LIG1-206ENST00000594067 RAB2AP61019 212 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 EWSR1Q01844 656 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIG1-206ENST00000594067 Q0VFX4 171 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 KIAA0141Q14154 515 aaPredicted RBP14.2□□□□□ -0.14
LIG1-206ENST00000594067 GNMTQ14749 295 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 CPEB3Q8NE35 698 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms