RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PSPNO60542 156 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 PDCD6O75340 191 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 ZNF737O75373 536 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 ECDO95905 644 aaPredicted RBP11.31□□□□□ -0.6
VMP1-210ENST00000589823 IGHV4-31P0DP07 118 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 FUT3P21217 361 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 BLVRBP30043 206 aaPredicted RBP11.31□□□□□ -0.6
VMP1-210ENST00000589823 VEGFCP49767 419 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 EFNB2P52799 333 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 LCN2P80188 198 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 PLA2G7Q13093 441 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 C11orf91Q3C1V1 193 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 RAB12Q6IQ22 244 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 METAP1DQ6UB28 335 aaPredicted RBP11.31□□□□□ -0.6
VMP1-210ENST00000589823 C17orf107Q6ZR85 190 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 FAM89BQ8N5H3 189 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 OR4S1Q8NGB4 309 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 OR5H6Q8NGV6 325 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 C18orf12Q96KH6 178 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 DPCDQ9BVM2 203 aaPredicted RBP11.31□□□□□ -0.6
VMP1-210ENST00000589823 PPA2Q9H2U2 334 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 LPAR2Q9HBW0 351 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 PEX16Q9Y5Y5 336 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 FUOMA2VDF0 154 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 A8MXK9 166 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 SOCS1O15524 211 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 SCGNO76038 276 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 GLAP06280 429 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 MSMBP08118 114 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 CD99P14209 185 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 OR3A1P47881 315 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 KCNJ3P48549 501 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 EDDM3BP56851 147 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 RBM39Q14498 530 aaKnown RBP11.3□□□□□ -0.6
VMP1-210ENST00000589823 EDDM3AQ14507 147 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 NKAPLQ5M9Q1 402 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 FGFRL1Q8N441 504 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 SAMD12Q8N8I0 201 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 DCUN1D5Q9BTE7 237 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 SHARPINQ9H0F6 387 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 PLEKHJ1Q9NW61 149 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 ZNF581Q9P0T4 197 aa11.3□□□□□ -0.6
VMP1-210ENST00000589823 RCC2Q9P258 522 aaKnown RBP11.3□□□□□ -0.6
VMP1-210ENST00000589823 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
VMP1-210ENST00000589823 A6NHS1 94 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 KIAA1324LA8MWY0 1029 aaPredicted RBP11.29□□□□□ -0.6
VMP1-210ENST00000589823 FCN3O75636 299 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 CSN2P05814 226 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 INHBBP09529 407 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 ZFP36P26651 326 aaKnown RBP11.29□□□□□ -0.6
VMP1-210ENST00000589823 CHATP28329 748 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 ATXN7L3Q14CW9 347 aaPredicted RBP11.29□□□□□ -0.6
VMP1-210ENST00000589823 UBE2NLQ5JXB2 153 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 BRICD5Q6PL45 260 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 Q6ZTK2 550 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 OR10R2Q8NGX6 335 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 RAB40AQ8WXH6 277 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 MSI2Q96DH6 328 aaKnown RBP11.29□□□□□ -0.6
VMP1-210ENST00000589823 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 POLR3KQ9Y2Y1 108 aaPredicted RBP11.29□□□□□ -0.6
VMP1-210ENST00000589823 TEX15Q9BXT5 2789 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 ITPR3Q14573 2671 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 OTOGQ6ZRI0 2925 aa11.29□□□□□ -0.6
VMP1-210ENST00000589823 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 A0A1W2PQ09 198 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 UBE2QL1A1L167 161 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
VMP1-210ENST00000589823 TGFAP01135 160 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 FOSL1P15407 271 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 ERP29P30040 261 aaKnown RBP11.28□□□□□ -0.6
VMP1-210ENST00000589823 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
VMP1-210ENST00000589823 AESQ08117 197 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 KRBOX4Q5JUW0 171 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 FOXB2Q5VYV0 432 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 C6orf201Q7Z4U5 140 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 GLCCI1Q86VQ1 547 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 OR4M1Q8NGD0 313 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 RAB3CQ96E17 227 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
VMP1-210ENST00000589823 CMTM3Q96MX0 182 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 NUDT16L1Q9BRJ7 211 aaKnown RBP11.28□□□□□ -0.6
VMP1-210ENST00000589823 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 ABCG5Q9H222 651 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 DIABLOQ9NR28 239 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms