RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MAP1AP78559 2803 aaPredicted RBP8.86□□□□□ -0.99
SMARCA4-213ENST00000587988 ABCA1O95477 2261 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 LOC105371242A0A075B767 164 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 SOCS1O15524 211 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 CD5LO43866 347 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 LY6G6DO95868 133 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 FOSL1P15407 271 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 VEGFCP49767 419 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 RORCP51449 518 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 TMEM50BP56557 158 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 EDDM3AQ14507 147 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 GRK1Q15835 563 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 MOGAT2Q3SYC2 334 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 PAN3Q58A45 887 aaKnown RBP8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 FOXB2Q5VYV0 432 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 CROCCP3Q8IVE0 287 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 OR8H2Q8N162 312 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM89BQ8N5H3 189 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 TPRX1Q8N7U7 411 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 CHST4Q8NCG5 386 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 OR5D13Q8NGL4 314 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 RAB40AQ8WXH6 277 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 TMEM186Q96B77 213 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 COQ2Q96H96 371 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 DCTN5Q9BTE1 182 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 URM1Q9BTM9 101 aaKnown RBP8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 DPCDQ9BVM2 203 aaPredicted RBP8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 C19orf12Q9NSK7 152 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 HIF1ANQ9NWT6 349 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 ING3Q9NXR8 418 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 RCC2Q9P258 522 aaKnown RBP8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 RSL24D1Q9UHA3 163 aaKnown RBP8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 ACANP16112 2415 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 CELSR1Q9NYQ6 3014 aa8.85□□□□□ -0.99
SMARCA4-213ENST00000587988 MEX3AA1L020 520 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A10PA6NDY2 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A18PA6NE21 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A16PA6NEW6 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A20PA6NIJ5 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A8PA6NJQ4 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A7PA6NKC0 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FOXI3A8MTJ6 420 aaPredicted RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A22PA8MWA6 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A12PA8MX19 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A5PA8MXJ8 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A23PA8MXZ1 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 MGST3O14880 152 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 GPR37O15354 613 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 NOL3O60936 208 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A15PP0C7V4 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A13PP0C7W8 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A14PP0C7W9 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FAM90A24PP0C7X0 464 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 RAB6AP20340 208 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 FLNAP21333 2647 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 CHATP28329 748 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 BLVRBP30043 206 aaPredicted RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 RANBP1P43487 201 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 GLIPR1P48060 266 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 EDDM3BP56851 147 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 AESQ08117 197 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 ATXN7L3Q14CW9 347 aaPredicted RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 NKAPLQ5M9Q1 402 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 RAB12Q6IQ22 244 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 C6orf201Q7Z4U5 140 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 LY6G5BQ8NDX9 201 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 PPP1R35Q8TAP8 253 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 PLPPR1Q8TBJ4 325 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 DYRK2Q92630 601 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 SLC25A38Q96DW6 304 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 SULT4A1Q9BR01 284 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 NUDT16L1Q9BRJ7 211 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 ABRACLQ9P1F3 81 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 RPUSD1Q9UJJ7 312 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 SPATA2Q9UM82 520 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 INSIG2Q9Y5U4 225 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 PEX16Q9Y5Y5 336 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 DSCAML1Q8TD84 2053 aa8.84□□□□□ -0.99
SMARCA4-213ENST00000587988 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 PPIAL4CA0A0B4J2A2 164 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 IGHV2-70DA0A0C4DH43 119 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 KIR2DS1A0A191URI9 304 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 SMIM31A0A1B0GVY4 71 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 UBE2QL1A1L167 161 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 RAB27BO00194 218 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 TMEM127O75204 238 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 PDCD6O75340 191 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 ECDO95905 644 aaPredicted RBP8.83□□□□□ -1
SMARCA4-213ENST00000587988 CSN2P05814 226 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 PPIAL4GP0DN37 164 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 ZNF182P17025 639 aaPredicted RBP8.83□□□□□ -1
SMARCA4-213ENST00000587988 FUT3P21217 361 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 DVL1P1P54792 670 aaPredicted RBP8.83□□□□□ -1
SMARCA4-213ENST00000587988 SCAND1P57086 179 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 RPL31P62899 125 aaKnown RBP8.83□□□□□ -1
SMARCA4-213ENST00000587988 ZNF273Q14593 569 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 PLAC9Q5JTB6 97 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 KRBOX4Q5JUW0 171 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 RSBN1Q5VWQ0 802 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms