RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 XRCC2O43543 280 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC19A2O60779 497 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 KHDRBS3O75525 346 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 IGF1P05019 195 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 TACSTD2P09758 323 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 OR8U8P0C7N1 319 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 IL32P24001 234 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 GABRA3P34903 492 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 GLP1RP43220 463 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 UBE2NP61088 152 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 ELF3P78545 371 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 PRKCDQ05655 676 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 CLINT1Q14677 625 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 GUSBP1Q15486 140 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 PLPPR5Q32ZL2 321 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 CCNJQ5T5M9 372 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 HBMQ6B0K9 141 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 ADNP2Q6IQ32 1131 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 Q6ZT83 130 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 COMTD1Q86VU5 262 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 CALHM1Q8IU99 346 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 Q8IYB0 196 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 PRSS58Q8IYP2 241 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 CBR4Q8N4T8 237 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 FDCSPQ8NFU4 85 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 OR52I1Q8NGK6 324 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 OR10Z1Q8NGY1 313 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5J2Q8NH18 312 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 RHOXF1Q8NHV9 184 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 CREB3L1Q96BA8 519 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 LRRC58Q96CX6 371 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 C9orf16Q9BUW7 83 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 RAB1BQ9H0U4 201 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 OR51B5Q9H339 312 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 ISYNA1Q9NPH2 558 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 ARMC1Q9NVT9 282 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 POLR3HQ9Y535 204 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 ENPP4Q9Y6X5 453 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 PCLOQ9Y6V0 5065 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1W2PRD5 423 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR6C6A6NF89 314 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 IQCF5A8MTL0 148 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 IQCF6A8MYZ5 107 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 UPK1AO00322 258 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 XKRYO14609 159 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PRKYO43930 277 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR7A10O76100 309 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 NDUFB2O95178 105 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ALDOBP05062 364 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CD55P08174 381 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ACSM4P0C7M7 580 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 STOMP27105 288 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 POU3F4P49335 361 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PRKXP51817 358 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 KRTAP10-6P60371 365 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RAB8AP61006 207 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ACTA2P62736 377 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ACTG2P63267 376 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LIPEQ05469 1076 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C1DQ13901 141 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GPR107Q5VW38 600 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 FBXW9Q5XUX1 488 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RASSF6Q6ZTQ3 369 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MRPL55Q7Z7F7 128 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C9orf40Q8IXQ3 194 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM251Q8N6I4 163 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CYB561A3Q8NBI2 242 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2T4Q8NH00 348 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GTF2H4Q92759 462 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SPTSSAQ969W0 71 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 POM121L2Q96KW2 1035 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SORT1Q99523 831 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OPRPNQ99935 248 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 KCTD14Q9BQ13 255 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 COPS4Q9BT78 406 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 YIPF3Q9GZM5 350 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR51I1Q9H343 314 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 USE1Q9NZ43 259 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CTSFQ9UBX1 484 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GLS2Q9UI32 602 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RNF115Q9Y4L5 304 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PCNX1Q96RV3 2341 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DOCK7Q96N67 2140 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TDRD6O60522 2096 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TNRC6AQ8NDV7 1962 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 HIVEP1P15822 2718 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 H7C417 338 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SCN2BO60939 215 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ICOSLGO75144 302 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MRPL33O75394 65 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 IGLV1-44P01699 117 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RBP4P02753 201 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 FABP3P05413 133 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 COX4I1P13073 169 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PGAM2P15259 253 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GGT1P19440 569 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 KDELR2P33947 212 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PMELP40967 661 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR1D4P47884 311 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RAB9AP51151 201 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms