RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 C15orf40Q8WUR7 153 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 DMRTB1Q96MA1 342 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 DPCDQ9BVM2 203 aaPredicted RBP11.9□□□□□ -0.5
SKA2-205ENST00000580541 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
SKA2-205ENST00000580541 SLIRPQ9GZT3 109 aaKnown RBP11.9□□□□□ -0.5
SKA2-205ENST00000580541 C6orf62Q9GZU0 229 aaPredicted RBP11.9□□□□□ -0.5
SKA2-205ENST00000580541 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 LPAR3Q9UBY5 353 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 F5H0A9 414 aaPredicted RBP11.89□□□□□ -0.51
SKA2-205ENST00000580541 TPPPO94811 219 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 CSN2P05814 226 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 ERP29P30040 261 aaKnown RBP11.89□□□□□ -0.51
SKA2-205ENST00000580541 LMO4P61968 165 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 HOXA4Q00056 320 aaPredicted RBP11.89□□□□□ -0.51
SKA2-205ENST00000580541 FOXB2Q5VYV0 432 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 WFDC11Q8NEX6 87 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 OR5H6Q8NGV6 325 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 NXF2Q9GZY0 626 aaKnown RBP11.89□□□□□ -0.51
SKA2-205ENST00000580541 RIMS4Q9H426 269 aaPredicted RBP11.89□□□□□ -0.51
SKA2-205ENST00000580541 KCNK15Q9H427 330 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
SKA2-205ENST00000580541 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
SKA2-205ENST00000580541 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 TRAV24A0A0B4J272 114 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 B4DSR2 109 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 SOCS1O15524 211 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 XRCC3O43542 346 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 ZNF737O75373 536 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 CLPXO76031 633 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 LIPFP07098 398 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 AMY2BP19961 511 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 RBMXP38159 391 aaKnown RBP11.88□□□□□ -0.51
SKA2-205ENST00000580541 MNDAP41218 407 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 CEBPDP49716 269 aaPredicted RBP11.88□□□□□ -0.51
SKA2-205ENST00000580541 GZMKP49863 264 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 EFNB2P52799 333 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 PITPNAQ00169 270 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
SKA2-205ENST00000580541 PDCD1Q15116 288 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 NKAPLQ5M9Q1 402 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
SKA2-205ENST00000580541 C17orf107Q6ZR85 190 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 CMTM4Q8IZR5 234 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 FAM216BQ8N7L0 139 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 ZNF565Q8N9K5 539 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 ST8SIA4Q92187 359 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 MALRD1Q5VYJ5 2156 aa11.88□□□□□ -0.51
SKA2-205ENST00000580541 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 TMEM82A0PJX8 343 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 RAB27BO00194 218 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 PSPNO60542 156 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 HPGDSO60760 199 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
SKA2-205ENST00000580541 CHATP28329 748 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 PAX5Q02548 391 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 KRBOX4Q5JUW0 171 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 TMEM69Q5SWH9 247 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 BAIAP2L2Q6UXY1 529 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 SPNS3Q6ZMD2 512 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 ZNF841Q6ZN19 808 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 LINC01356Q8N9X3 169 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 OR4S1Q8NGB4 309 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 H1FXQ92522 213 aaKnown RBP11.87□□□□□ -0.51
SKA2-205ENST00000580541 SHARPINQ9H0F6 387 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 PPA2Q9H2U2 334 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 ETAA1Q9NY74 926 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 OR6C3Q9NZP0 311 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 PDZD2O15018 2839 aa11.87□□□□□ -0.51
SKA2-205ENST00000580541 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 A0A1W2PR64 198 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 hADV38S2A0JD32 116 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 TMEM30CPA0ZSE6 113 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 A8MXK9 166 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 HSPB6O14558 160 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 CTDSP2O14595 271 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 CD3GP09693 182 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 GATA3P23771 443 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 OR3A1P47881 315 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 EDDM3BP56851 147 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 RPL31P62899 125 aaKnown RBP11.86□□□□□ -0.51
SKA2-205ENST00000580541 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 CNPY1Q3B7I2 92 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 CDNFQ49AH0 187 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 SLC35E4Q6ICL7 350 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 LINC00299Q6ZSB3 139 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 BTN2A1Q7KYR7 527 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 C6orf201Q7Z4U5 140 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms