RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SSX2Q16385 188 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 C16orf54Q6UWD8 224 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 PRR18Q8N4B5 295 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF488Q96MN9 340 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 ZPBPQ9BS86 351 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 RHOFQ9HBH0 211 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 A0A1W2PNU3 283 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 PHF1O43189 567 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 IFNA21P01568 189 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 OR8U9P0C7N5 309 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 SPP1P10451 314 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 AADACP22760 399 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 MAGEA5P43359 124 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 SSX9Q7RTT3 188 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 OR8U1Q8NH10 309 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 NTNG2Q96CW9 530 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 PRRX2Q99811 253 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 FGF23Q9GZV9 251 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 ARRDC1-AS1Q9H2J1 176 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 SLC7A11Q9UPY5 501 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 CACNA1HO95180 2353 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 DEDDO75618 318 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 BCL3P20749 454 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 CD80P33681 288 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 PRR14LQ5THK1 2151 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 RP1L1Q8IWN7 2480 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 ADAMTS17Q8TE56 1095 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 PARPBPQ9NWS1 579 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 AMDHD2Q9Y303 409 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 NME2P1O60361 137 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 LILRA1O75019 489 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 S100A8P05109 93 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 S100A9P06702 114 aaKnown RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 MMP7P09237 267 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 PET100P0DJ07 73 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 GFRA1P56159 465 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 NAAAQ02083 359 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 NHLH2Q02577 135 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 ABLIM2Q6H8Q1 611 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 HAGHLQ6PII5 290 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 LHFPL2Q6ZUX7 228 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 DMBX1Q8NFW5 382 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 GLYATL2Q8WU03 294 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 KCNE4Q8WWG9 221 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 TP53RKQ96S44 253 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 PFDN5Q99471 154 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 BCO1Q9HAY6 547 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 SEBOXQ9HB31 216 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 UQCC1Q9NVA1 299 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 MEMO1Q9Y316 297 aa9.04□□□□□ -0.96
TOP3A-209ENST00000580095 CNOT1A5YKK6 2376 aaKnown RBP9.04□□□□□ -0.96
TOP3A-209ENST00000580095 C9orf172C9J069 976 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 NEURL1O76050 574 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 LYL1P12980 280 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 OMGP23515 440 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 ITGA3P26006 1051 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 DEFA6Q01524 100 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 MALLQ13021 153 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 TMEM187Q14656 261 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SMCO1Q147U7 214 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SPIN3Q5JUX0 258 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 Q6ZRG5 221 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 Q6ZSR3 168 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SVBPQ8N300 66 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 HSD17B11Q8NBQ5 300 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 NEK7Q8TDX7 302 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 MAGT1Q9H0U3 335 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 NAA60Q9H7X0 242 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 TRAV39A0A0B4J263 110 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 TNFSF12O43508 249 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SERPINA7P05543 415 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 CYC1P08574 325 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 CBR1P16152 277 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 G0S2P27469 103 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 RBM11P57052 281 aaKnown RBP9.03□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF616Q08AN1 781 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 PJVKQ0ZLH3 352 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SURF2Q15527 256 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-209ENST00000580095 SPATA46Q5T0L3 261 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 ATP1A1-AS1Q5TC04 95 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 TMEM42Q69YG0 159 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 ZFP82Q8N141 532 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 C10orf35Q96D05 121 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 C14orf144Q96I85 54 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 RIMS4Q9H426 269 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-209ENST00000580095 C12orf49Q9H741 205 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 MMP26Q9NRE1 261 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 RCL1Q9Y2P8 373 aaKnown RBP9.03□□□□□ -0.96
TOP3A-209ENST00000580095 KCNIP3Q9Y2W7 256 aa9.03□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF816-ZNF321PA0A0X1KG74 233 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 RRP8O43159 456 aaKnown RBP9.02□□□□□ -0.96
TOP3A-209ENST00000580095 PDCD6O75340 191 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms