RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LOC102723996A0A087X1L8 192 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 MED19A0JLT2 244 aaPredicted RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 TRIM77I1YAP6 450 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 ONECUT2O95948 504 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 OR5AC1P0C628 307 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CLDN15P56746 228 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 PSG4Q00888 419 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 POC1AQ8NBT0 407 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SLC30A7Q8NEW0 376 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 OR2V1Q8NHB1 315 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 M1APQ8TC57 530 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SPSB1Q96BD6 273 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 INTS12Q96CB8 462 aaKnown RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 PAPOLGQ9BWT3 736 aaKnown RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 TLNRD1Q9H1K6 362 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CALHM2Q9HA72 323 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 BCO1Q9HAY6 547 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 RHOFQ9HBH0 211 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 PROK2Q9HC23 129 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CYTL1Q9NRR1 136 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 TMEM38BQ9NVV0 291 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 NECAP2Q9NVZ3 263 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 P4HTMQ9NXG6 502 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 FBXL17Q9UF56 701 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 TIMM10BQ9Y5J6 103 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 V9GYS6 101 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CPAMD8Q8IZJ3 1885 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 RAB19A4D1S5 217 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 KIAA1324LA8MWY0 1029 aaPredicted RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 PHF1O43189 567 aaPredicted RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 MRPL33O75394 65 aaKnown RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 DUSP1P28562 367 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SRD5A2P31213 254 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 RPL35P42766 123 aaKnown RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 CYB561P49447 251 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 ASCL1P50553 236 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 PPT1P50897 306 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 ZNF92Q03936 586 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 HGFACQ04756 655 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 ACER2Q5QJU3 275 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 DCAF12Q5T6F0 453 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 RTL6Q6ICC9 239 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 TCEAL6Q6IPX3 200 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 FBXW12Q6X9E4 464 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 Q6ZRG5 221 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 LYZL2Q7Z4W2 148 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 OSR2Q8N2R0 312 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SUMF1Q8NBK3 374 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 FGFBP3Q8TAT2 258 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 TCEAL3Q969E4 200 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 PRRX2Q99811 253 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SPXQ9BT56 116 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 ZNF286AQ9HBT8 521 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 FAM166BA8MTA8 275 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CER1O95813 267 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CTSDP07339 412 aaPredicted RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 CD79AP11912 226 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 ZNF708P17019 499 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 AKR1C3P42330 323 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SUCLG1P53597 346 aaKnown RBP4.62□□□□□ -1.67
VAPA-203ENST00000577539 TMEM33P57088 247 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 TRA2AQ13595 282 aaKnown RBP eCLIP4.62□□□□□ -1.67
VAPA-203ENST00000577539 PABPC1L2AQ5JQF8 200 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 SPINK14Q6IE38 97 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 UQCC3Q6UW78 93 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 HSD17B11Q8NBQ5 300 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 OR11L1Q8NGX0 322 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 AIFM2Q9BRQ8 373 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 TM2D1Q9BX74 207 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 PARPBPQ9NWS1 579 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 FREM1Q5H8C1 2179 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 CEP192Q8TEP8 1941 aa4.62□□□□□ -1.67
VAPA-203ENST00000577539 IGKV1-27A0A075B6S5 117 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 A0A087WWL8 130 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 F8VVB4 439 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 F8VWA3 439 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 NME2P1O60361 137 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 HLA-HP01893 362 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 RNASE1P07998 156 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 OMGP23515 440 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 LPAR6P43657 344 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 PCBD1P61457 104 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 NAAAQ02083 359 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 ZNF239Q16600 458 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 LINC00696Q6ZRV3 163 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 LDLRAD3Q86YD5 345 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SKA3Q8IX90 412 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 OR10AD1Q8NGE0 317 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SECTM1Q8WVN6 248 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 THOC3Q96J01 351 aaKnown RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 AQP10Q96PS8 301 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 GPHA2Q96T91 129 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 SLC5A7Q9GZV3 580 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 MMP26Q9NRE1 261 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 UQCC1Q9NVA1 299 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 DNAJB11Q9UBS4 358 aa4.61□□□□□ -1.67
VAPA-203ENST00000577539 UBE2J1Q9Y385 318 aaPredicted RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 RP1L1Q8IWN7 2480 aaPredicted RBP4.61□□□□□ -1.67
VAPA-203ENST00000577539 TRBV6-7A0A0A0MS04 114 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms