RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 DCTN3O75935 186 aa15.08■□□□□ 0
NUP88-203ENST00000572019 NFYBP25208 207 aa15.08■□□□□ 0
NUP88-203ENST00000572019 PTGFRP43088 359 aa15.08■□□□□ 0
NUP88-203ENST00000572019 RBP2P50120 134 aa15.08■□□□□ 0
NUP88-203ENST00000572019 MTCP1P56278 107 aa15.08■□□□□ 0
NUP88-203ENST00000572019 SCN1BQ07699 218 aa15.08■□□□□ 0
NUP88-203ENST00000572019 KPNB1Q14974 876 aaKnown RBP15.08■□□□□ 0
NUP88-203ENST00000572019 ATXN7L3Q14CW9 347 aaPredicted RBP15.08■□□□□ 0
NUP88-203ENST00000572019 SPIN3Q5JUX0 258 aa15.08■□□□□ 0
NUP88-203ENST00000572019 NXNL2Q5VZ03 156 aa15.08■□□□□ 0
NUP88-203ENST00000572019 Q6P435 159 aa15.08■□□□□ 0
NUP88-203ENST00000572019 ZNF695Q8IW36 515 aa15.08■□□□□ 0
NUP88-203ENST00000572019 Q8IYB0 196 aa15.08■□□□□ 0
NUP88-203ENST00000572019 KIRREL1Q96J84 757 aa15.08■□□□□ 0
NUP88-203ENST00000572019 TEX12Q9BXU0 123 aa15.08■□□□□ 0
NUP88-203ENST00000572019 EXOSC4Q9NPD3 245 aaKnown RBP15.08■□□□□ 0
NUP88-203ENST00000572019 SORL1Q92673 2214 aa15.07■□□□□ 0
NUP88-203ENST00000572019 CCL24O00175 119 aa15.07■□□□□ 0
NUP88-203ENST00000572019 RPLP1P05386 114 aaKnown RBP15.07■□□□□ 0
NUP88-203ENST00000572019 KRT8P05787 483 aa15.07■□□□□ 0
NUP88-203ENST00000572019 FAM106CPP0CH98 169 aa15.07■□□□□ 0
NUP88-203ENST00000572019 CGB3P0DN86 165 aa15.07■□□□□ 0
NUP88-203ENST00000572019 CGB7P0DN87 165 aa15.07■□□□□ 0
NUP88-203ENST00000572019 CEACAM3P40198 252 aa15.07■□□□□ 0
NUP88-203ENST00000572019 MNDAP41218 407 aa15.07■□□□□ 0
NUP88-203ENST00000572019 ARHGDIBP52566 201 aa15.07■□□□□ 0
NUP88-203ENST00000572019 CDC42P60953 191 aa15.07■□□□□ 0
NUP88-203ENST00000572019 ACTR3P61158 418 aa15.07■□□□□ 0
NUP88-203ENST00000572019 PDZK1IP1Q13113 114 aa15.07■□□□□ 0
NUP88-203ENST00000572019 UNQ9370/PRO34162Q6UXP9 181 aa15.07■□□□□ 0
NUP88-203ENST00000572019 OR5D18Q8NGL1 313 aa15.07■□□□□ 0
NUP88-203ENST00000572019 CHPT1Q8WUD6 406 aa15.07■□□□□ 0
NUP88-203ENST00000572019 TOMM40LQ969M1 308 aa15.07■□□□□ 0
NUP88-203ENST00000572019 MNTQ99583 582 aa15.07■□□□□ 0
NUP88-203ENST00000572019 SCOCQ9UIL1 159 aa15.07■□□□□ 0
NUP88-203ENST00000572019 C3orf84H3BNL1 204 aa15.06■□□□□ 0
NUP88-203ENST00000572019 SLC33A1O00400 549 aaPredicted RBP15.06■□□□□ 0
NUP88-203ENST00000572019 SH2D1BO14796 132 aa15.06■□□□□ 0
NUP88-203ENST00000572019 FKBP6O75344 327 aa15.06■□□□□ 0
NUP88-203ENST00000572019 ATF1P18846 271 aa15.06■□□□□ 0
NUP88-203ENST00000572019 MNAT1P51948 309 aa15.06■□□□□ 0
NUP88-203ENST00000572019 ATP1B3P54709 279 aa15.06■□□□□ 0
NUP88-203ENST00000572019 GNGT1P63211 74 aa15.06■□□□□ 0
NUP88-203ENST00000572019 DCTN2Q13561 401 aaKnown RBP15.06■□□□□ 0
NUP88-203ENST00000572019 KRBOX4Q5JUW0 171 aa15.06■□□□□ 0
NUP88-203ENST00000572019 C12orf73Q69YU5 71 aa15.06■□□□□ 0
NUP88-203ENST00000572019 THNSL2Q86YJ6 484 aa15.06■□□□□ 0
NUP88-203ENST00000572019 STPG2Q8N412 459 aa15.06■□□□□ 0
NUP88-203ENST00000572019 DNAAF1Q8NEP3 725 aa15.06■□□□□ 0
NUP88-203ENST00000572019 OR4D6Q8NGJ1 314 aa15.06■□□□□ 0
NUP88-203ENST00000572019 OR10AC1Q8NH08 325 aa15.06■□□□□ 0
NUP88-203ENST00000572019 TMEM163Q8TC26 289 aa15.06■□□□□ 0
NUP88-203ENST00000572019 RPEQ96AT9 228 aa15.06■□□□□ 0
NUP88-203ENST00000572019 COMMD4Q9H0A8 199 aa15.06■□□□□ 0
NUP88-203ENST00000572019 ZFP57Q9NU63 452 aa15.06■□□□□ 0
NUP88-203ENST00000572019 METTL15A6NJ78 407 aa15.05■□□□□ -0
NUP88-203ENST00000572019 AQP12BA6NM10 295 aa15.05■□□□□ -0
NUP88-203ENST00000572019 OOSP1A8MZH6 123 aa15.05■□□□□ -0
NUP88-203ENST00000572019 KDM4BO94953 1096 aa15.05■□□□□ -0
NUP88-203ENST00000572019 ZNF44P15621 663 aa15.05■□□□□ -0
NUP88-203ENST00000572019 TMEM11P17152 192 aa15.05■□□□□ -0
NUP88-203ENST00000572019 ECI1P42126 302 aa15.05■□□□□ -0
NUP88-203ENST00000572019 PRRX1P54821 245 aa15.05■□□□□ -0
NUP88-203ENST00000572019 HES1Q14469 280 aa15.05■□□□□ -0
NUP88-203ENST00000572019 CDK5R1Q15078 307 aa15.05■□□□□ -0
NUP88-203ENST00000572019 TP53I3Q53FA7 332 aa15.05■□□□□ -0
NUP88-203ENST00000572019 CASC10Q5T4H9 136 aa15.05■□□□□ -0
NUP88-203ENST00000572019 CCDC144NLQ6NUI1 221 aa15.05■□□□□ -0
NUP88-203ENST00000572019 AQP12AQ8IXF9 295 aa15.05■□□□□ -0
NUP88-203ENST00000572019 OR9G1Q8NH87 305 aa15.05■□□□□ -0
NUP88-203ENST00000572019 CREB3L1Q96BA8 519 aa15.05■□□□□ -0
NUP88-203ENST00000572019 FGGYQ96C11 551 aa15.05■□□□□ -0
NUP88-203ENST00000572019 THTPAQ9BU02 230 aa15.05■□□□□ -0
NUP88-203ENST00000572019 DCLRE1BQ9H816 532 aa15.05■□□□□ -0
NUP88-203ENST00000572019 A0A1W2PPE3 182 aa15.04■□□□□ -0
NUP88-203ENST00000572019 ZNF729A6NN14 1252 aaPredicted RBP15.04■□□□□ -0
NUP88-203ENST00000572019 ZAR1LA6NP61 321 aa15.04■□□□□ -0
NUP88-203ENST00000572019 J3QR06 171 aa15.04■□□□□ -0
NUP88-203ENST00000572019 HSPB6O14558 160 aa15.04■□□□□ -0
NUP88-203ENST00000572019 RAMP3O60896 148 aa15.04■□□□□ -0
NUP88-203ENST00000572019 SERPINA3P01011 423 aa15.04■□□□□ -0
NUP88-203ENST00000572019 IGKV1D-33P01593 117 aa15.04■□□□□ -0
NUP88-203ENST00000572019 IGKV1-33P01594 117 aa15.04■□□□□ -0
NUP88-203ENST00000572019 IGHG2P01859 326 aa15.04■□□□□ -0
NUP88-203ENST00000572019 ISL1P61371 349 aa15.04■□□□□ -0
NUP88-203ENST00000572019 ZNF85Q03923 595 aa15.04■□□□□ -0
NUP88-203ENST00000572019 LTC4SQ16873 150 aa15.04■□□□□ -0
NUP88-203ENST00000572019 SLC35E3Q7Z769 313 aa15.04■□□□□ -0
NUP88-203ENST00000572019 OR10H4Q8NGA5 316 aa15.04■□□□□ -0
NUP88-203ENST00000572019 OR13A1Q8NGR1 328 aa15.04■□□□□ -0
NUP88-203ENST00000572019 PP6455Q8WZ26 134 aa15.04■□□□□ -0
NUP88-203ENST00000572019 ADI1Q9BV57 179 aa15.04■□□□□ -0
NUP88-203ENST00000572019 H2AFY2Q9P0M6 372 aaPredicted RBP15.04■□□□□ -0
NUP88-203ENST00000572019 GLS2Q9UI32 602 aa15.04■□□□□ -0
NUP88-203ENST00000572019 PSG11Q9UQ72 335 aa15.04■□□□□ -0
NUP88-203ENST00000572019 TRAV39A0A0B4J263 110 aa15.03■□□□□ -0
NUP88-203ENST00000572019 KBTBD11-OT1A0A1B0GTJ5 212 aa15.03■□□□□ -0
NUP88-203ENST00000572019 CSN2P05814 226 aa15.03■□□□□ -0
NUP88-203ENST00000572019 GLP1RP43220 463 aa15.03■□□□□ -0
NUP88-203ENST00000572019 GNG10P50151 68 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms