RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 RNF133Q8WVZ7 376 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 PCGF1Q9BSM1 259 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 SLC52A3Q9NQ40 469 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 OBP2AQ9NY56 170 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 LTN1O94822 1766 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 MMP23AO75900 390 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 RPL7P18124 248 aaKnown RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 NPY1RP25929 384 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 SPRYD7Q5W111 196 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 VN1R1Q9GZP7 353 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 CES1P1Q9UKY3 287 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 MRPS2Q9Y399 296 aaKnown RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 LANCL1O43813 399 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TCF23Q7RTU1 214 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 LINC01465Q8N7H1 131 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 OR4F17Q8NGA8 305 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 CHD4Q14839 1912 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 BAZ2AQ9UIF9 1905 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 P01737 135 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 AREGP15514 252 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 METAP1P53582 386 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 YBX1P67809 324 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TBC1D28Q2M2D7 210 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 PRR18Q8N4B5 295 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM252Q8N6L7 170 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 NOXO1Q8NFA2 376 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 APOBEC3DQ96AK3 386 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 ROBO1Q9Y6N7 1651 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 MYO18AQ92614 2054 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 IER3P46695 156 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 FLT3LGP49771 235 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 RND3P61587 244 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 BCORP1Q8N888 145 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 NFAM1Q8NET5 270 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 OR10G3Q8NGC4 313 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 OR8B3Q8NGG8 313 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM106BQ9NUM4 274 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 MRM2Q9UI43 246 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TRBV5-7A0A0A0MS05 114 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 A0A1B0GTI1 187 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 A1L4Q6 167 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 C1QTNF9BB2RNN3 333 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 DHHO43323 396 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 SP1P08047 785 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 NOGQ13253 232 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 SLC36A1Q7Z2H8 476 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 RPS19BP1Q86WX3 136 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 RNASEH2CQ8TDP1 164 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 OR4C12Q96R67 309 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 TOPAZ1Q8N9V7 1692 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 RNF222A6NCQ9 220 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 ICOSLGO75144 302 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 PSMB2P49721 201 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 OR10AG1Q8NH19 301 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 PLPPR1Q8TBJ4 325 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 MRPL18Q9H0U6 180 aaKnown RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 RBKSQ9H477 322 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 OBP2BQ9NPH6 170 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 SLC6A13Q9NSD5 602 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 CACNG5Q9UF02 275 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 CYSLTR1Q9Y271 337 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 PRSS38A1L453 326 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 COLCA2A8K830 154 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 H0Y980 276 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 NEURL1O76050 574 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 SNAI1O95863 264 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 SELENOTP62341 195 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 ACSF3Q4G176 576 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-216ENST00000569240 HEPN1Q6WQI6 88 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 MRGPRX1Q96LB2 322 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 MENTQ9BUN1 341 aa6.3□□□□□ -1.4
CNOT1-216ENST00000569240 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 FBLL1A6NHQ2 334 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 NDUFS6O75380 124 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 TIMP1P01033 207 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 PRSS1P07477 247 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 OPRM1P35372 400 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 GPX4P36969 197 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 Q56UQ5 140 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 ALG14Q96F25 216 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 GPR62Q9BZJ7 368 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 ISG15P05161 165 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 UBE2V1Q13404 147 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 DCAF12L2Q5VW00 463 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 KIRREL2Q6UWL6 708 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 RNF175Q8N4F7 328 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 BHLHE23Q8NDY6 225 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 OR6C1Q96RD1 312 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 LINC01553A4QN01 128 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 LRRC30A6NM36 301 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 LMX1BO60663 402 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 CCL23P55773 120 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 ROM1Q03395 351 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SMIM21Q3B7S5 101 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF740Q8NDX6 193 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 MYOZ3Q8TDC0 251 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms