RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 P2RX4Q99571 388 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 TBX5Q99593 518 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 COMMD4Q9H0A8 199 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 TCRBV3S1A0A5B6 114 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 CALCBP10092 127 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 OR3A4PP47883 348 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 SNU13P55769 128 aaKnown RBP14.78□□□□□ -0.04
NME3-204ENST00000563498 DGCR2P98153 550 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 FLOT2Q14254 428 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 LHFPL2Q6ZUX7 228 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 RNF144BQ7Z419 303 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 ZNF329Q86UD4 541 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 SPSB1Q96BD6 273 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 IL4I1Q96RQ9 567 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 RHOFQ9HBH0 211 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 GSTK1Q9Y2Q3 226 aa14.78□□□□□ -0.04
NME3-204ENST00000563498 ZNF729A6NN14 1252 aaPredicted RBP14.77□□□□□ -0.05
NME3-204ENST00000563498 RAMP3O60896 148 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 KDM4BO94953 1096 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 CCDC159P0C7I6 412 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 ATF1P18846 271 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 EPHA2P29317 976 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 GYS2P54840 703 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 GP2P55259 537 aaKnown RBP14.77□□□□□ -0.05
NME3-204ENST00000563498 C8orf86Q6ZUL3 223 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 COMMD1Q8N668 190 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 CHST4Q8NCG5 386 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 OR9G1Q8NH87 305 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 ADAT3Q96EY9 351 aaPredicted RBP14.77□□□□□ -0.05
NME3-204ENST00000563498 KRT84Q9NSB2 600 aa14.77□□□□□ -0.05
NME3-204ENST00000563498 H0YHG0 523 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 FGF16O43320 207 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 HTR1FP30939 366 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 ISL1P61371 349 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 RBM39Q14498 530 aaKnown RBP14.76□□□□□ -0.05
NME3-204ENST00000563498 C17orf58Q2M2W7 97 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 KRBOX4Q5JUW0 171 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 TMEM244Q5VVB8 128 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 RDH10Q8IZV5 341 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 C5orf56Q8N8D9 126 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 TOMM40LQ969M1 308 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 UTP4Q969X6 686 aaKnown RBP14.76□□□□□ -0.05
NME3-204ENST00000563498 RPEQ96AT9 228 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 COQ2Q96H96 371 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 OPALINQ96PE5 141 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 OR6C3Q9NZP0 311 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 AMMECR1Q9Y4X0 333 aaPredicted RBP14.76□□□□□ -0.05
NME3-204ENST00000563498 U3KQK5 164 aa14.76□□□□□ -0.05
NME3-204ENST00000563498 IGKV1-12A0A0C4DH73 117 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 KBTBD11-OT1A0A1B0GTJ5 212 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 NUDT19A8MXV4 375 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 MITFO75030 526 aaPredicted RBP14.75□□□□□ -0.05
NME3-204ENST00000563498 IGKV1D-12P01611 117 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 ISG15P05161 165 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 SNRNP70P08621 437 aaKnown RBP14.75□□□□□ -0.05
NME3-204ENST00000563498 ZNF44P15621 663 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 KIR3DL2P43630 455 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 SLC35B1P78383 322 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 C18orf65Q6ZTR6 163 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 FAM220AQ7Z4H9 259 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 KLHL30-AS1Q8NEE0 82 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 OR10H4Q8NGA5 316 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 OR56B4Q8NH76 319 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 KIRREL1Q96J84 757 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 NOL4LQ96MY1 436 aaPredicted RBP14.75□□□□□ -0.05
NME3-204ENST00000563498 ENOPH1Q9UHY7 261 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 KIAA2026Q5HYC2 2103 aa14.75□□□□□ -0.05
NME3-204ENST00000563498 SERPINE3A8MV23 424 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 SLC33A1O00400 549 aaPredicted RBP14.74□□□□□ -0.05
NME3-204ENST00000563498 MT-ND2P03891 347 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 CGB3P0DN86 165 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 CGB7P0DN87 165 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 ZNF20P17024 532 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 TMED1Q13445 227 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 UTF1Q5T230 341 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 KDM4DQ6B0I6 523 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 Q6P435 159 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 ZNF695Q8IW36 515 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 SAXO1Q8IYX7 474 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 RNF166Q96A37 237 aaPredicted RBP14.74□□□□□ -0.05
NME3-204ENST00000563498 FGGYQ96C11 551 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 MBOAT4Q96T53 435 aa14.74□□□□□ -0.05
NME3-204ENST00000563498 A0A1W2PPI3 338 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 J3QR06 171 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 ZFPL1O95159 310 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 IGHG2P01859 326 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 TMEM11P17152 192 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 NFYBP25208 207 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 ATP6V1E1P36543 226 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 SCN1BQ07699 218 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 FOXRED2Q8IWF2 684 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 DRAM1Q8N682 238 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 CCDC197Q8NCU1 140 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 OR2G2Q8NGZ5 317 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 TFAP2CQ92754 450 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 NCOR1P1Q9H4R4 102 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 LINC00574Q9H8X3 128 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 GNG8Q9UK08 70 aa14.73□□□□□ -0.05
NME3-204ENST00000563498 LSM4Q9Y4Z0 139 aaKnown RBP14.73□□□□□ -0.05
NME3-204ENST00000563498 G3V2T6 193 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms