RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RPL5P46777 297 aaKnown RBP8.88□□□□□ -0.99
TPM1-229ENST00000561242 SERPINB10P48595 397 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 PRRX1P54821 245 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 P2RX3P56373 397 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 ATXN7L3Q14CW9 347 aaPredicted RBP8.88□□□□□ -0.99
TPM1-229ENST00000561242 C2orf76Q3KRA6 126 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 PIGYQ3MUY2 71 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 C1orf100Q5SVJ3 147 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 C6orf183Q5T699 404 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 RAB12Q6IQ22 244 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 TRAT1Q6PIZ9 186 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 ASCL4Q6XD76 172 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 ZNF841Q6ZN19 808 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 C1orf122Q6ZSJ8 110 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 LURAP1LQ8IV03 231 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 SUMF2Q8NBJ7 301 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 OR51D1Q8NGF3 324 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 LHX4Q969G2 390 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 ATG5Q9H1Y0 275 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 RIMS4Q9H426 269 aaPredicted RBP8.88□□□□□ -0.99
TPM1-229ENST00000561242 DIABLOQ9NR28 239 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 MMP26Q9NRE1 261 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 MGAT4AQ9UM21 535 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 UBE2J1Q9Y385 318 aaPredicted RBP8.88□□□□□ -0.99
TPM1-229ENST00000561242 ARID1AO14497 2285 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 IGKV1-12A0A0C4DH73 117 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 AIPO00170 330 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 TNFRSF13BO14836 293 aaPredicted RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 GEMIN2O14893 280 aaKnown RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 SLC22A1O15245 554 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 PDCD6O75340 191 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 SC5DO75845 299 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 IGKV1D-12P01611 117 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 CD3GP09693 182 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 ZNF728P0DKX0 622 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 ADRA2CP18825 462 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 LMO1P25800 156 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 SDC2P34741 201 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 RBMXP38159 391 aaKnown RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 RORCP51449 518 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 GP2P55259 537 aaKnown RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 PAX8Q06710 450 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 AESQ08117 197 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 HNRNPA0Q13151 305 aaKnown RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 ARFRP1Q13795 201 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 NHLRC3Q5JS37 347 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 GPR107Q5VW38 600 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 CD200R1LQ6Q8B3 271 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 Q6ZTK2 550 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 USP43Q70EL4 1123 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 C1QL2Q7Z5L3 287 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 CAPSLQ8WWF8 208 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 CREB3L1Q96BA8 519 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 NKX3-1Q99801 234 aaPredicted RBP8.87□□□□□ -0.99
TPM1-229ENST00000561242 LIN7BQ9HAP6 207 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 TAS2R3Q9NYW6 316 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 ZNF222Q9UK12 451 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 LINC00312Q9Y6C7 94 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 AKAP6Q13023 2319 aa8.87□□□□□ -0.99
TPM1-229ENST00000561242 ODAMA1E959 279 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 UBE2QL1A1L167 161 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 F8VVB4 439 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 F8VWA3 439 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 SLC33A1O00400 549 aaPredicted RBP8.86□□□□□ -0.99
TPM1-229ENST00000561242 TCF21O43680 179 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 TFF1P04155 84 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 CRYBA1P05813 215 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 EPHA1P21709 976 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 NFYBP25208 207 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 MNDAP41218 407 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 VEGFCP49767 419 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 RIPPLY3P57055 190 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 HOXA4Q00056 320 aaPredicted RBP8.86□□□□□ -0.99
TPM1-229ENST00000561242 TMEM200BQ69YZ2 307 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 SLC35E4Q6ICL7 350 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 IL17RELQ6ZVW7 336 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 VMO1Q7Z5L0 202 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 OR4S1Q8NGB4 309 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 S100A16Q96FQ6 103 aaKnown RBP8.86□□□□□ -0.99
TPM1-229ENST00000561242 FUNDC2Q9BWH2 189 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 ABCB10Q9NRK6 738 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 ADAM30Q9UKF2 790 aa8.86□□□□□ -0.99
TPM1-229ENST00000561242 TRAV40A0A0B4J280 105 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 ZNF729A6NN14 1252 aaPredicted RBP8.85□□□□□ -0.99
TPM1-229ENST00000561242 KIAA1324LA8MWY0 1029 aaPredicted RBP8.85□□□□□ -0.99
TPM1-229ENST00000561242 C22orf46C9J442 243 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 RGS11O94810 467 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 IL1AP01583 271 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 CSN2P05814 226 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 VSIG8P0DPA2 414 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 SELLP14151 372 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 RAB6AP20340 208 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 PRTN3P24158 256 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 IL3RAP26951 378 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 CEACAM3P40198 252 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 CLDN12P56749 244 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 RPS27AP62979 156 aaKnown RBP8.85□□□□□ -0.99
TPM1-229ENST00000561242 SFXN4Q6P4A7 337 aa8.85□□□□□ -0.99
TPM1-229ENST00000561242 CLVS1Q8IUQ0 354 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms