RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 OR5H8P0DN80 308 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 PGAM2P15259 253 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 SORDQ00796 357 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 IL24Q13007 206 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 P2RY6Q15077 328 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 UNQ6126/PRO20091Q6UXV3 157 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 ZNF680Q8NEM1 530 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 ZNF2Q9BSG1 426 aaPredicted RBP15.17■□□□□ 0.02
SNX1-208ENST00000559844 RTL8AQ9BWD3 113 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 RHOFQ9HBH0 211 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 KCNJ16Q9NPI9 418 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 MTCH1Q9NZJ7 389 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 A0A1W2PR80 420 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 DBX1A6NMT0 343 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 CLDN14O95500 239 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 RAC2P15153 192 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 SRSF1Q07955 248 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX1-208ENST00000559844 TSC22D1Q15714 1073 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 KCTD9Q7L273 389 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 MICU1Q9BPX6 476 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 ELOVL5Q9NYP7 299 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 ARPC5O15511 151 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 TUBG1P23258 451 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 FAM27E3Q08E93 113 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 SRSF7Q16629 238 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX1-208ENST00000559844 SPATA46Q5T0L3 261 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 HAGHLQ6PII5 290 aaPredicted RBP15.16■□□□□ 0.02
SNX1-208ENST00000559844 DHRS11Q6UWP2 260 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 MYPOPQ86VE0 399 aaPredicted RBP15.16■□□□□ 0.02
SNX1-208ENST00000559844 WDR31Q8NA23 367 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 TUBG2Q9NRH3 451 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 DECR2Q9NUI1 292 aa15.16■□□□□ 0.02
SNX1-208ENST00000559844 NOS1APO75052 506 aaPredicted RBP15.15■□□□□ 0.02
SNX1-208ENST00000559844 IGKV3-15P01624 115 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 CTSDP07339 412 aaPredicted RBP15.15■□□□□ 0.02
SNX1-208ENST00000559844 RNF224P0DH78 156 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 RPA2P15927 270 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 CA6P23280 308 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 S100A11P31949 105 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 UCP2P55851 309 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 BAMBIQ13145 260 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 BRICD5Q6PL45 260 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 CLEC18BQ6UXF7 455 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 GSG1LQ6UXU4 331 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 SPACA1Q9HBV2 294 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 RCC2Q9P258 522 aaKnown RBP15.15■□□□□ 0.02
SNX1-208ENST00000559844 DOPEY1Q5JWR5 2465 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 TRAV14DV4A0A0A6YYC5 116 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 J3QT63 122 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 CCSO14618 274 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 SYNGR1O43759 233 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 LILRA1O75019 489 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 MPC2O95563 127 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 SLC25A4P12235 298 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 IL13RA2Q14627 380 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 PDCD1Q15116 288 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 FBXL19-AS1Q494R0 122 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 ZNF660Q6AZW8 331 aaPredicted RBP15.15■□□□□ 0.02
SNX1-208ENST00000559844 TMEM65Q6PI78 240 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 SLC22A25Q6T423 547 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 Q6ZS49 121 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 TMUB2Q71RG4 321 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 OR1J1Q8NGS3 322 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 SLC25A40Q8TBP6 338 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 DYRK2Q92630 601 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 OR2J1Q9GZK6 312 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 OR51I2Q9H344 312 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 CHMP1AQ9HD42 196 aaPredicted RBP15.15■□□□□ 0.02
SNX1-208ENST00000559844 RAB18Q9NP72 206 aa15.15■□□□□ 0.02
SNX1-208ENST00000559844 IQCF6A8MYZ5 107 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 GLRA1P23415 457 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 CYCSP99999 105 aaKnown RBP15.14■□□□□ 0.01
SNX1-208ENST00000559844 IKZF1Q13422 519 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 DAZAP2Q15038 168 aaPredicted RBP15.14■□□□□ 0.01
SNX1-208ENST00000559844 BHLHA15Q7RTS1 189 aaPredicted RBP15.14■□□□□ 0.01
SNX1-208ENST00000559844 LRRC46Q96FV0 321 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 UBQLN2Q9UHD9 624 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 AMDHD2Q9Y303 409 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 MAB21L2Q9Y586 359 aa15.14■□□□□ 0.01
SNX1-208ENST00000559844 HELZ2Q9BYK8 2649 aaKnown RBP15.14■□□□□ 0.01
SNX1-208ENST00000559844 PRR14LQ5THK1 2151 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 FAM25EA8MYX2 175 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 PI3P19957 117 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 CALCRP30988 508 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 GLP1RP43220 463 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 SLC9A3R2Q15599 337 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 BATF2Q8N1L9 274 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 RNASE6Q93091 150 aaKnown RBP15.13■□□□□ 0.01
SNX1-208ENST00000559844 ADGRG4Q8IZF6 3080 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 FAM221AA4D161 298 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 LRP5LA4QPB2 252 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 C5orf51A6NDU8 294 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 C16orf97H3BN30 126 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 RP2O75695 350 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 GLAP06280 429 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 PRKACAP17612 351 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 GRNP28799 593 aaKnown RBP15.13■□□□□ 0.01
SNX1-208ENST00000559844 CCKARP32238 428 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 SUPT4H1P63272 117 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms