RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
NEK9-211ENST00000557673 PTGFRP43088 359 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 IER3P46695 156 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 CEBPDP49716 269 aaPredicted RBP13.63□□□□□ -0.23
NEK9-211ENST00000557673 PROK1P58294 105 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 LDLRAD3Q86YD5 345 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 FAM58AQ8N1B3 248 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 JAGN1Q8N5M9 183 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 LHX4Q969G2 390 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 SDSLQ96GA7 329 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 SIRPDQ9H106 197 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 RHOFQ9HBH0 211 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 IL36GQ9NZH8 169 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 RPUSD1Q9UJJ7 312 aaKnown RBP13.63□□□□□ -0.23
NEK9-211ENST00000557673 MEGF11A6BM72 1044 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 BTBD17A6NE02 478 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 RFPL4AA6NLU0 287 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 RFPL4AL1F8VTS6 287 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 IGHV4-59P01825 116 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 PRKACAP17612 351 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 KRTAP10-3P60369 221 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 ARF6P62330 175 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 C2orf68Q2NKX9 166 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 ASCL4Q6XD76 172 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 CD177Q8N6Q3 437 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 UQCC2Q9BRT2 126 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 CNTD2Q9H8S5 307 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 HMG20AQ9NP66 347 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 OR14J1Q9UGF5 321 aa13.62□□□□□ -0.23
NEK9-211ENST00000557673 MRPS28Q9Y2Q9 187 aaKnown RBP13.62□□□□□ -0.23
NEK9-211ENST00000557673 NDUFB3O43676 98 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 CDRT1O95170 752 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 CD36P16671 472 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 FGF9P31371 208 aaPredicted RBP13.61□□□□□ -0.23
NEK9-211ENST00000557673 GABRA2P47869 451 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 MTNR1BP49286 362 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 ZNF146Q15072 292 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 DGUOKQ16854 277 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 SPIN3Q5JUX0 258 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 ELP2Q6IA86 826 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 C22orf42Q6IC83 251 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 Q8NFD4 153 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 OR10K1Q8NGX5 313 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 GFI1Q99684 422 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 MRPS26Q9BYN8 205 aaKnown RBP13.61□□□□□ -0.23
NEK9-211ENST00000557673 C16orf95Q9H693 158 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 ELL3Q9HB65 397 aaPredicted RBP13.61□□□□□ -0.23
NEK9-211ENST00000557673 MAB21L2Q9Y586 359 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 KPTNQ9Y664 436 aa13.61□□□□□ -0.23
NEK9-211ENST00000557673 A0A0U1RQK1 487 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 SHISA3A0PJX4 238 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 HAND1O96004 215 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 CALCBP10092 127 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 GADD45AP24522 165 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 MYL9P24844 172 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 PRDX2P32119 198 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 BMXP51813 675 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 SNU13P55769 128 aaKnown RBP13.6□□□□□ -0.23
NEK9-211ENST00000557673 RSU1Q15404 277 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 LRRC10Q5BKY1 277 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 GLT8D1Q68CQ7 371 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 AWAT2Q6E213 333 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 DHRS7BQ6IAN0 325 aaPredicted RBP13.6□□□□□ -0.23
NEK9-211ENST00000557673 ZNF561Q8N587 486 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 LY6G5BQ8NDX9 201 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 FAM110DQ8TAY7 271 aaPredicted RBP13.6□□□□□ -0.23
NEK9-211ENST00000557673 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
NEK9-211ENST00000557673 MED30Q96HR3 178 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 DMRTB1Q96MA1 342 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 OR51E2Q9H255 320 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 EXOSC4Q9NPD3 245 aaKnown RBP13.6□□□□□ -0.23
NEK9-211ENST00000557673 TXNL4BQ9NX01 149 aaKnown RBP13.6□□□□□ -0.23
NEK9-211ENST00000557673 ONECUT1Q9UBC0 465 aa13.6□□□□□ -0.23
NEK9-211ENST00000557673 TRAV1-2A0A0B4J238 106 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 FBP1P09467 338 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 CD37P11049 281 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 CAV3P56539 151 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 FBLN7Q53RD9 439 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 C1orf100Q5SVJ3 147 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 PDZD9Q8IXQ8 264 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 ZNRF1Q8ND25 227 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 TMEM185AQ8NFB2 350 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 FOXRED1Q96CU9 486 aaPredicted RBP13.59□□□□□ -0.23
NEK9-211ENST00000557673 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 CHCHD6Q9BRQ6 235 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 DCTN5Q9BTE1 182 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 METTL9Q9H1A3 318 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 SEBOXQ9HB31 216 aaPredicted RBP13.59□□□□□ -0.23
NEK9-211ENST00000557673 SLC25A10Q9UBX3 287 aaPredicted RBP13.59□□□□□ -0.23
NEK9-211ENST00000557673 SSR3Q9UNL2 185 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 GSTK1Q9Y2Q3 226 aa13.59□□□□□ -0.23
NEK9-211ENST00000557673 SLC22A1O15245 554 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 ZNF737O75373 536 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 TSPAN15O95858 294 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 CSF1P09603 554 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 SERPINA2P20848 420 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 DUSP1P28562 367 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 GUCA2AQ02747 115 aa13.58□□□□□ -0.24
NEK9-211ENST00000557673 COL10A1Q03692 680 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms