RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TAC1P20366 129 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 CRABP1P29762 137 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 GPR176Q14439 515 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 TPRXLQ17RH7 258 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 Q499Y3 187 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 IDNKQ5T6J7 187 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 LAIR2Q6ISS4 152 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 ERICH5Q6P6B1 374 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 SETD3Q86TU7 594 aaPredicted RBP0.38□□□□□ -2.35
SNX6-204ENST00000555541 FER1L6-AS1Q8NA97 138 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 C22orf15Q8WYQ4 148 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 OR8D1Q8WZ84 308 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 SDHAF3Q9NRP4 125 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 POLR3AO14802 1390 aaPredicted RBP0.37□□□□□ -2.35
SNX6-204ENST00000555541 IGLV3-9A0A075B6K5 115 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 SYNJ2BP-COX16A0A087WUM0 186 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 UPK2O00526 184 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 MPHOSPH10O00566 681 aaKnown RBP0.37□□□□□ -2.35
SNX6-204ENST00000555541 TCAPO15273 167 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 RLN2P04090 185 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 OR5AL1P0C617 328 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 GALNT10Q86SR1 603 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 OR11G2Q8NGC1 345 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 OR6K6Q8NGW6 343 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 OR6K3Q8NGY3 331 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 OR4X1Q8NH49 305 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 TMBIM1Q969X1 311 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 ADTRPQ96IZ2 230 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 CAPZA3Q96KX2 299 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 BPIFA3Q9BQP9 254 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 ANAPC13Q9BS18 74 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 COA1Q9GZY4 146 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 VPS37BQ9H9H4 285 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 DDIT4Q9NX09 232 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 PHLDA3Q9Y5J5 127 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 COL18A1P39060 1754 aa0.37□□□□□ -2.35
SNX6-204ENST00000555541 SLC25A20O43772 301 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 ERLIN1O75477 346 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 GYPCP04921 128 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 CECR9P0C854 216 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 S100A2P29034 98 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 FAM201AQ5SY85 155 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 TSNAXQ99598 290 aaKnown RBP0.36□□□□□ -2.35
SNX6-204ENST00000555541 C11orf70Q9BRQ4 267 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 AUNIPQ9H7T9 357 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 FBXL3Q9UKT7 428 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 CFL2Q9Y281 166 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 HEY1Q9Y5J3 304 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 MINOS1-NBL1R4GNA1 71 aa0.36□□□□□ -2.35
SNX6-204ENST00000555541 KLK1P06870 262 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 CD9P21926 228 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 PRTN3P24158 256 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 RCN1Q15293 331 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 MMDQ15546 238 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 FAM27D1Q5T7N8 215 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 SYT6Q5T7P8 510 aaPredicted RBP0.35□□□□□ -2.35
SNX6-204ENST00000555541 LGALS9CQ6DKI2 356 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 UGT2A3Q6UWM9 527 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 TPGS1Q6ZTW0 290 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 MICU2Q8IYU8 434 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 CMTM8Q8IZV2 173 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 C10orf126Q8N4M7 172 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 CCDC148Q8NFR7 591 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 TWIST2Q8WVJ9 160 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 OLFM3Q96PB7 478 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 Q9BRP9 147 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 SPZ1Q9BXG8 430 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 ULBP1Q9BZM6 244 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 CYSTM1Q9H1C7 97 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 ARMC7Q9H6L4 198 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 NMRK1Q9NWW6 199 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 DOK5Q9P104 306 aa0.35□□□□□ -2.35
SNX6-204ENST00000555541 RALBP11234 206 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 IL12BP29460 328 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 EVI2BP34910 448 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 MAGEA1P43355 309 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 MAGEA12P43365 314 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 BNIP2Q12982 314 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 C16orf87Q6PH81 154 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 NELFCDQ8IXH7 590 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 OFCC1Q8IZS5 231 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 OR52K1Q8NGK4 314 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 PEX13Q92968 403 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 NAT6Q93015 286 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 CPB2Q96IY4 423 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 SLC38A1Q9H2H9 487 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 C12orf4Q9NQ89 552 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 KCNIP2Q9NS61 270 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 PEF1Q9UBV8 284 aaKnown RBP0.34□□□□□ -2.36
SNX6-204ENST00000555541 SLC22A14Q9Y267 594 aa0.34□□□□□ -2.36
SNX6-204ENST00000555541 IGSF23A1L1A6 192 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 ZNF99A8MXY4 864 aaPredicted RBP0.33□□□□□ -2.36
SNX6-204ENST00000555541 M0R1B8 84 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 TRAPPC6AO75865 159 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 GABRR2P28476 465 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 RPS5P46782 204 aaKnown RBP0.33□□□□□ -2.36
SNX6-204ENST00000555541 HTR4Q13639 388 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 APOFQ13790 326 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 WDR43Q15061 677 aaKnown RBP eCLIP0.33□□□□□ -2.36
SNX6-204ENST00000555541 OR8G1Q15617 311 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms