RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 HAPLN4Q86UW8 402 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 Q8N6K4 173 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 OR9Q2Q8NGE9 314 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 HAVCR2Q8TDQ0 301 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 PYURFQ96I23 114 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 KIRREL1Q96J84 757 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 HOPXQ9BPY8 73 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-204ENST00000553605 BTBD10Q9BSF8 475 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 SAR1AQ9NR31 198 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 ARMC1Q9NVT9 282 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 ACTR3BQ9P1U1 418 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 LAMP5Q9UJQ1 280 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 V9GYS6 101 aa10.63□□□□□ -0.71
PRPF39-204ENST00000553605 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 IGHV3-72A0A0B4J1Y9 119 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 ODAMA1E959 279 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 ZNF729A6NN14 1252 aaPredicted RBP10.62□□□□□ -0.71
PRPF39-204ENST00000553605 LINC01619G3V211 115 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 SIRPB1O00241 398 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 SEMG1P04279 462 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 CALCBP10092 127 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
PRPF39-204ENST00000553605 HCCSP53701 268 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 SNU13P55769 128 aaKnown RBP10.62□□□□□ -0.71
PRPF39-204ENST00000553605 PITPNAQ00169 270 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 DEGS2Q6QHC5 323 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 Q8IYB0 196 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 PGAM4Q8N0Y7 254 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 OR14K1Q8NGZ2 314 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 OR2T10Q8NGZ9 312 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 LEAP2Q969E1 77 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 S1PR3Q99500 378 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 CHCHD6Q9BRQ6 235 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 ST6GALNAC5Q9BVH7 336 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 TMED9Q9BVK6 235 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 MROQ9BYG7 248 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 ALX4Q9H161 411 aaPredicted RBP10.62□□□□□ -0.71
PRPF39-204ENST00000553605 PLSCR3Q9NRY6 295 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 RBFOX1Q9NWB1 397 aaKnown RBP10.62□□□□□ -0.71
PRPF39-204ENST00000553605 NUFIP1Q9UHK0 495 aaKnown RBP10.62□□□□□ -0.71
PRPF39-204ENST00000553605 ZNF580Q9UK33 172 aa10.62□□□□□ -0.71
PRPF39-204ENST00000553605 TNCP24821 2201 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 KBTBD11-OT1A0A1B0GTJ5 212 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 ENTPD6O75354 484 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 SOX14O95416 240 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 TTRP02766 147 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 FSTP19883 344 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 PPIFP30405 207 aaKnown RBP10.61□□□□□ -0.71
PRPF39-204ENST00000553605 SOX6P35712 828 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 NPBWR2P48146 333 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 RAB9AP51151 201 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 MCUR1Q96AQ8 359 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 IL1RAPQ9NPH3 570 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 ING3Q9NXR8 418 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 RAB21Q9UL25 225 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 PSG11Q9UQ72 335 aa10.61□□□□□ -0.71
PRPF39-204ENST00000553605 IGHV1-3A0A0C4DH29 117 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 SH2D1BO14796 132 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 EDF1O60869 148 aaKnown RBP10.6□□□□□ -0.71
PRPF39-204ENST00000553605 OR2H2O95918 312 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 GAPDHP04406 335 aaKnown RBP10.6□□□□□ -0.71
PRPF39-204ENST00000553605 FABP3P05413 133 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 PRKACAP17612 351 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 FUT6P51993 359 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 ZNF816Q0VGE8 651 aaPredicted RBP10.6□□□□□ -0.71
PRPF39-204ENST00000553605 BNIP1Q12981 228 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 ZNF829Q3KNS6 432 aaPredicted RBP10.6□□□□□ -0.71
PRPF39-204ENST00000553605 KRBOX4Q5JUW0 171 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 SPIN3Q5JUX0 258 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 ANKRD13BQ86YJ7 626 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 IZUMO1Q8IYV9 350 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 OR10X1Q8NGY0 326 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 RNF166Q96A37 237 aaPredicted RBP10.6□□□□□ -0.71
PRPF39-204ENST00000553605 NABP2Q9BQ15 211 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
PRPF39-204ENST00000553605 OR6C3Q9NZP0 311 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 STUB1Q9UNE7 303 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 WSB1Q9Y6I7 421 aa10.6□□□□□ -0.71
PRPF39-204ENST00000553605 IGHV4OR15-8A0A075B7B6 117 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 A0A087WW49 117 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 TRBV2A0A0J9YWF9 115 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 A0A1B0GTI1 187 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 DHRS7CA6NNS2 312 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 HSD17B6O14756 317 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 ZNF254O75437 659 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 E2F6O75461 281 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 GMNNO75496 209 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 KRT36O76013 467 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 BCL3P20749 454 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 REG1BP48304 166 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 GNG10P50151 68 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 HMGA2P52926 109 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 MFGE8Q08431 387 aaPredicted RBP10.59□□□□□ -0.71
PRPF39-204ENST00000553605 UBE2V2Q15819 145 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms