RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C10orf67Q8IYJ2 551 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 ZNF485Q8NCK3 441 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 OR4P4Q8NGL7 312 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 OR13D1Q8NGV5 346 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 PLPPR1Q8TBJ4 325 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 SGCDQ92629 289 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 LEAP2Q969E1 77 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 TMEM133Q9H2Q1 129 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 ZNF702PQ9H963 129 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 DIMT1Q9UNQ2 313 aaKnown RBP14.68□□□□□ -0.06
SHMT2-206ENST00000553529 KIAA2026Q5HYC2 2103 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 TRAV8-7A0A075B6U6 113 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 TRAV24A0A0B4J272 114 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 A6NDX4 124 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 SH2D7A6NKC9 451 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-206ENST00000553529 H0YJX3 145 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 SH2D1BO14796 132 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 CDK2P24941 298 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 LMO1P25800 156 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 EFNB2P52799 333 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 RPS11P62280 158 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHMT2-206ENST00000553529 MEF2CQ06413 473 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-206ENST00000553529 OR5D14Q8NGL3 314 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 MRPL48Q96GC5 212 aaKnown RBP14.67□□□□□ -0.06
SHMT2-206ENST00000553529 OR5M11Q96RB7 305 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 TCF19Q9Y242 345 aa14.67□□□□□ -0.06
SHMT2-206ENST00000553529 hCG_1809904A0A1W2PP81 198 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1W2PPE2 198 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1W2PR64 198 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1W2PRV1 198 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 ODAMA1E959 279 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 DEGS1O15121 323 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 VSIG10L2P0DP72 767 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 RAB3AP20336 220 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 C21orf33P30042 268 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-206ENST00000553529 INSL4Q14641 139 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 LTC4SQ16873 150 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 KRBOX4Q5JUW0 171 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 OGFRL1Q5TC84 451 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-206ENST00000553529 RPL22L1Q6P5R6 122 aaKnown RBP14.66□□□□□ -0.06
SHMT2-206ENST00000553529 C1QL4Q86Z23 238 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 DHRSXQ8N5I4 330 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 KLHDC1Q8N7A1 406 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 OR13A1Q8NGR1 328 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 FAM110DQ8TAY7 271 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-206ENST00000553529 UBALD1Q8TB05 177 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 NDNFQ8TB73 568 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 TMEM106AQ96A25 262 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 PGLYRP3Q96LB9 341 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 RDH12Q96NR8 316 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 GPER1Q99527 375 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 CDCA4Q9BXL8 241 aa14.66□□□□□ -0.06
SHMT2-206ENST00000553529 SEBOXQ9HB31 216 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-206ENST00000553529 OGG1O15527 345 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 HTR3BO95264 441 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 DCKP27707 260 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 ERP29P30040 261 aaKnown RBP14.65□□□□□ -0.06
SHMT2-206ENST00000553529 BLCAPP62952 87 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 DEFA6Q01524 100 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 SLC34A1Q06495 639 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 DMKNQ6E0U4 476 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-206ENST00000553529 AHSA2Q719I0 299 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 SAXO1Q8IYX7 474 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 GPR148Q8TDV2 347 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 GHSRQ92847 366 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 SMIM19Q96E16 107 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 TMEM80Q96HE8 168 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 CLEC7AQ9BXN2 247 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 BABAM2Q9NXR7 383 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 FBLN5Q9UBX5 448 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 KIF25Q9UIL4 384 aa14.65□□□□□ -0.06
SHMT2-206ENST00000553529 TBL2Q9Y4P3 447 aaKnown RBP14.65□□□□□ -0.06
SHMT2-206ENST00000553529 VWFP04275 2813 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 VGLL3A8MV65 326 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 RBP4P02753 201 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 CAPGP40121 348 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 GLP1RP43220 463 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 ST3GAL4Q11206 333 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 DDI2Q5TDH0 399 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 ABHD12Q8N2K0 398 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 NRG4Q8WWG1 115 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 FOXRED1Q96CU9 486 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-206ENST00000553529 OR14A2Q96R54 314 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 SERTAD4Q9NUC0 356 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 GLS2Q9UI32 602 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 ING4Q9UNL4 249 aa14.64□□□□□ -0.07
SHMT2-206ENST00000553529 UBE2J1Q9Y385 318 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-206ENST00000553529 TET2Q6N021 2002 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-206ENST00000553529 TRGV10A0A0A0MS01 117 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 TRBV5-5A0A0J9YX44 114 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 A0A1W2PPE3 182 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 ALX3O95076 343 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 IGFBP3P17936 291 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-206ENST00000553529 SERPINA2P20848 420 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 MRPL28Q13084 256 aaKnown RBP14.63□□□□□ -0.07
SHMT2-206ENST00000553529 DIAPH2-AS1Q14236 149 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 PAN3Q58A45 887 aaKnown RBP14.63□□□□□ -0.07
SHMT2-206ENST00000553529 TTC23Q5W5X9 447 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 BPIFB6Q8NFQ5 453 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 OR4C13Q8NGP0 309 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms