RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 LIN54Q6MZP7 749 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 FIP1L1Q6UN15 594 aaKnown RBP7.05□□□□□ -1.28
RAB5B-210ENST00000553116 KCTD9Q7L273 389 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 NLRC3Q7RTR2 1065 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 MRGPRGQ86SM5 289 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 WFDC8Q8IUA0 241 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 SPICQ8N5J4 248 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 OR5T2Q8NGG2 359 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 OR13G1Q8NGZ3 307 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 TOMM40LQ969M1 308 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 BOD1Q96IK1 185 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 PDCD10Q9BUL8 212 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 OR14J1Q9UGF5 321 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 C14orf166Q9Y224 244 aaKnown RBP7.05□□□□□ -1.28
RAB5B-210ENST00000553116 ROS1P08922 2347 aa7.05□□□□□ -1.28
RAB5B-210ENST00000553116 RAB19A4D1S5 217 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 KNG1P01042 644 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 MPZP25189 248 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 GLP1RP43220 463 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 FXYD4P59646 89 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 FAM122CQ6P4D5 195 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 OVCH2Q7RTZ1 564 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 ADAD2Q8NCV1 583 aaKnown RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 ALX4Q9H161 411 aaPredicted RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 SPACA1Q9HBV2 294 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 DIDO1Q9BTC0 2240 aaKnown RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TRAV20A0A0B4J274 112 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 PLSCR5A0PG75 271 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TMEM210A6NLX4 147 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 SIRPB1O00241 398 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 DEGS1O15121 323 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 ZNF205O95201 554 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TUBG1P23258 451 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 FPR2P25090 351 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 KLRB1Q12918 225 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 GRK1Q15835 563 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 LYG2Q86SG7 212 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 WDR86Q86TI4 376 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 SLC25A42Q86VD7 318 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 Q8IYB0 196 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 ZCCHC14Q8WYQ9 949 aaKnown RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 RND1Q92730 232 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 MRGPRFQ96AM1 343 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 PHB2Q99623 299 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TUBG2Q9NRH3 451 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 C16orf97H3BN30 126 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 MLNRO43193 412 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 GIPP09681 153 aaPredicted RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 SELENOVP59797 346 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 PAN3Q58A45 887 aaKnown RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 PRAMEF6Q5VXH4 476 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TMEM65Q6PI78 240 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 PEG10Q86TG7 708 aaKnown RBP7.04□□□□□ -1.28
RAB5B-210ENST00000553116 LINC00596Q86U02 117 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 C1orf174Q8IYL3 243 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 FAM169BQ8N8A8 192 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 SUMF2Q8NBJ7 301 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 OR2Z1Q8NG97 314 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 SYT3Q9BQG1 590 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 WDR13Q9H1Z4 485 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 CXXC4Q9H2H0 198 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 TUBD1Q9UJT1 453 aa7.04□□□□□ -1.28
RAB5B-210ENST00000553116 POLEQ07864 2286 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 OR5H14A6NHG9 310 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 KLF3P57682 345 aaPredicted RBP7.03□□□□□ -1.28
RAB5B-210ENST00000553116 RAP2BP61225 183 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 HERV-K104P61576 105 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 CTAG1AP78358 180 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 RBM39Q14498 530 aaKnown RBP7.03□□□□□ -1.28
RAB5B-210ENST00000553116 IL13RA2Q14627 380 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 SLC9A3R2Q15599 337 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 NHLRC3Q5JS37 347 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 ZNF826PQ6ZT77 177 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 ZFAND1Q8TCF1 268 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 CLEC4MQ9H2X3 399 aaPredicted RBP7.03□□□□□ -1.28
RAB5B-210ENST00000553116 ARID1AO14497 2285 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 KIAA2026Q5HYC2 2103 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 SHANK1Q9Y566 2161 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 TRBV23-1A0A0A0MS06 115 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 C9orf170A2RU37 121 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 PRSS44E7EML9 344 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 LGALS8O00214 317 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 CCSO14618 274 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 BET1O15155 118 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 SLC34A2O95436 690 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 KITLGP21583 273 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 RPS23P62266 143 aaKnown RBP7.03□□□□□ -1.28
RAB5B-210ENST00000553116 C2orf68Q2NKX9 166 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 ABCA11PQ4W5N1 156 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 Q8NFD4 153 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 DPCDQ9BVM2 203 aaPredicted RBP7.03□□□□□ -1.28
RAB5B-210ENST00000553116 C5orf66Q9H5L9 145 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 FN3KRPQ9HA64 309 aa7.03□□□□□ -1.28
RAB5B-210ENST00000553116 CHD3Q12873 2000 aaKnown RBP7.03□□□□□ -1.28
RAB5B-210ENST00000553116 GLRA1P23415 457 aa7.02□□□□□ -1.28
RAB5B-210ENST00000553116 FCGR2CP31995 323 aa7.02□□□□□ -1.28
RAB5B-210ENST00000553116 SEC61A1P61619 476 aaKnown RBP7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms