RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SPACA5Q96QH8 159 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 RIMS4Q9H426 269 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 MMP26Q9NRE1 261 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 MGAT4AQ9UM21 535 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 FAM96BQ9Y3D0 163 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 TRAV8-7A0A075B6U6 113 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 A0A0G2JK05 382 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 METTL21EPA6NDL7 271 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 C22orf46C9J442 243 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 SLC22A1O15245 554 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 CRTAPO75718 401 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 SFTPBP07988 381 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF728P0DKX0 622 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 ARSBP15848 533 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 SERPINA2P20848 420 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 FUT3P21217 361 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 CFPP27918 469 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 UBE2E1P51965 193 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 P2RX3P56373 397 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 LGALS4P56470 323 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 SCAND1P57086 179 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 ARF6P62330 175 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 SCN1BQ07699 218 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 RAB11BQ15907 218 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 MIDNQ504T8 468 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 SLC16A12Q6ZSM3 486 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 OR10A7Q8NGE5 316 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 OR4D6Q8NGJ1 314 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 OR13C5Q8NGS8 318 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 CORO2AQ92828 525 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 MUL1Q969V5 352 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 PTX4Q96A99 478 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 PCGF1Q9BSM1 259 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 TMEM59Q9BXS4 323 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 OPN4Q9UHM6 478 aa8.48□□□□□ -1.05
TRAFD1-208ENST00000552890 IGKV1-12A0A0C4DH73 117 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 BTBD17A6NE02 478 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 TRIM77I1YAP6 450 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 PIN1P1O15428 100 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 IGKV1D-12P01611 117 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 MGMTP16455 207 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 AMY2BP19961 511 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 RAB3BP20337 219 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 OR3A4PP47883 348 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 RPS25P62851 125 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 FABP5Q01469 135 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 KRBOX4Q5JUW0 171 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 TMEM91Q6ZNR0 172 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 C17orf107Q6ZR85 190 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 TRAPPC6BQ86SZ2 158 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 RTN4RL2Q86UN3 420 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 NEK7Q8TDX7 302 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 TMEM158Q8WZ71 300 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 SGCDQ92629 289 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 SEH1LQ96EE3 360 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 SIRPDQ9H106 197 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 STEAP1Q9UHE8 339 aa8.47□□□□□ -1.05
TRAFD1-208ENST00000552890 IGHV1-69DA0A0B4J2H0 117 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 TMEM30CPA0ZSE6 113 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 ODAMA1E959 279 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 MAGEA13PA6NCF6 341 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 ZNF729A6NN14 1252 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 NOTOA8MTQ0 251 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 SIRPB1O00241 398 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 SLC33A1O00400 549 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 CDRT1O95170 752 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 PAHP00439 452 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 FSHBP01225 129 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 IGHV1-69P01742 117 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 FBP1P09467 338 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 MMP9P14780 707 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 CD36P16671 472 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 GADD45AP24522 165 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 RPL15P61313 204 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 MRPS15P82914 257 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 NEDD8Q15843 81 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 AANATQ16613 207 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 ATAD3CQ5T2N8 411 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 C6orf183Q5T699 404 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 TMEM200BQ69YZ2 307 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 ASPHD2Q6ICH7 369 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 SLC35E4Q6ICL7 350 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 RAB12Q6IQ22 244 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 Q6P435 159 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 HEPN1Q6WQI6 88 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 VMO1Q7Z5L0 202 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 LRRTM1Q86UE6 522 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 OR56B1Q8NGI3 324 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 PHF21AQ96BD5 680 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 DPCDQ9BVM2 203 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 SELENOIQ9C0D9 397 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 DPAGT1Q9H3H5 408 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms