RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MRPL37Q9BZE1 423 aaKnown RBP5.52□□□□□ -1.53
CDCA3-209ENST00000544610 EGLN1Q9GZT9 426 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 HES4Q9HCC6 221 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 DYNLRB1Q9NP97 96 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 GPR173Q9NS66 373 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 TAS2R8Q9NYW2 309 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 TREM2Q9NZC2 230 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 V9GYH0 126 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 ARFGEF3Q5TH69 2177 aa5.52□□□□□ -1.53
CDCA3-209ENST00000544610 TENM1Q9UKZ4 2725 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 IGKV1-27A0A075B6S5 117 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 TMEM272A0A1B0GTI8 110 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 FAM230AA0A1W2PPH8 454 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 LYNX1G3V0Z9 82 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 TRAPPC2LH3BP13 241 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 GABARAPH6UMI1 98 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 RAB27BO00194 218 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 MLNRO43193 412 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 CDC14BO60729 498 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 HPGDSO60760 199 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 DIRAS3O95661 229 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 PAHP00439 452 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 LYNX1P0DP58 116 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 MGMTP16455 207 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 ELK1P19419 428 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 TBPP20226 339 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 CBX5P45973 191 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 HAAOP46952 286 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 GPM6AP51674 278 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 CAV3P56539 151 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 AP3S2P59780 193 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 ERVS71-1P61550 626 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 SCGB2A2Q13296 93 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 UNC119Q13432 240 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 RSU1Q15404 277 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 NKPD1Q17RQ9 610 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 MSMPQ1L6U9 139 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 SPATA46Q5T0L3 261 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 HES5Q5TA89 166 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 CNIH2Q6PI25 160 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 Q6ZR03 302 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 CMTM4Q8IZR5 234 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 C1orf87Q8N0U7 546 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 OSR2Q8N2R0 312 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 POC1AQ8NBT0 407 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 OR51F2Q8NH61 342 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 CLDND2Q8NHS1 167 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 SMIM4Q8WVI0 70 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 TMEM186Q96B77 213 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 ORAI1Q96D31 301 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 ELMOD3Q96FG2 381 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 C7orf50Q9BRJ6 194 aaKnown RBP5.51□□□□□ -1.53
CDCA3-209ENST00000544610 SRRQ9GZT4 340 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 DNTTIP1Q9H147 329 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 LPAR5Q9H1C0 372 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 RIMS4Q9H426 269 aaPredicted RBP5.51□□□□□ -1.53
CDCA3-209ENST00000544610 NCOR1P1Q9H4R4 102 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 FN3KRPQ9HA64 309 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 HIF1ANQ9NWT6 349 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 TAAR3PQ9P1P4 343 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 EXTL2Q9UBQ6 330 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 GLS2Q9UI32 602 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 DUSP13Q9UII6 198 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 RBMX2Q9Y388 322 aaKnown RBP5.51□□□□□ -1.53
CDCA3-209ENST00000544610 NPTNQ9Y639 398 aa5.51□□□□□ -1.53
CDCA3-209ENST00000544610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.536e-8■■■□□ 16.7
CDCA3-209ENST00000544610 TMEM89A2RUT3 159 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 A6NIN4 97 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 LRRC30A6NM36 301 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 FOXI3A8MTJ6 420 aaPredicted RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 FAM25AB3EWG3 89 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 FAM25CB3EWG5 89 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 FAM25GB3EWG6 89 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 SRRM5B3KS81 715 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 FAM157AC9JC47 383 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 NDUFA2O43678 99 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 UPK1BO75841 260 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 ECDO95905 644 aaPredicted RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 KNG1P01042 644 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 LHBP01229 141 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 IGHV1-46P01743 117 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 HPXP02790 462 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 EIF4EP06730 217 aaKnown RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 MSMBP08118 114 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 GSTT2BP0CG30 244 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 MUC1P15941 1255 aaPredicted RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 HIST1H1DP16402 221 aaKnown RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 EGR1P18146 543 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 CDK2P24941 298 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 LMO1P25800 156 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 GPR6P46095 362 aaPredicted RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 OR3A4PP47883 348 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 RBM11P57052 281 aaKnown RBP5.5□□□□□ -1.53
CDCA3-209ENST00000544610 HILS1P60008 231 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 ACTBP60709 375 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 ACTG1P63261 375 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 MAB21L1Q13394 359 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 DYRK1AQ13627 763 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 KCNJ8Q15842 424 aa5.5□□□□□ -1.53
CDCA3-209ENST00000544610 ZNF79Q15937 498 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms