RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 GATBO75879 557 aaKnown RBP12.12□□□□□ -0.47
CD4-212ENST00000544344 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 CGB3P0DN86 165 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 CGB7P0DN87 165 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 TMEM11P17152 192 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 PTGFRP43088 359 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 TRIM25Q14258 630 aaKnown RBP12.12□□□□□ -0.47
CD4-212ENST00000544344 HNF4GQ14541 408 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 TEX38Q6PEX7 206 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 OR4D6Q8NGJ1 314 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 OR8U1Q8NH10 309 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 OR9G1Q8NH87 305 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 RPEQ96AT9 228 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 KIRREL1Q96J84 757 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 NDE1Q9NXR1 346 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 GLS2Q9UI32 602 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 RPP14O95059 124 aaKnown RBP12.11□□□□□ -0.47
CD4-212ENST00000544344 CSN2P05814 226 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 LYL1P12980 280 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
CD4-212ENST00000544344 POU3F4P49335 361 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 ACTR3P61158 418 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 FHL3Q13643 280 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 FOXRED2Q8IWF2 684 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 DNAAF1Q8NEP3 725 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 MNTQ99583 582 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 COMMD4Q9H0A8 199 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 PPIL3Q9H2H8 161 aaKnown RBP12.11□□□□□ -0.47
CD4-212ENST00000544344 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
CD4-212ENST00000544344 PCDHB16Q9NRJ7 776 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 GSTK1Q9Y2Q3 226 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 SMAD5-AS1Q9Y6J3 95 aa12.11□□□□□ -0.47
CD4-212ENST00000544344 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 FUOMA2VDF0 154 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 ZNF729A6NN14 1252 aaPredicted RBP12.1□□□□□ -0.47
CD4-212ENST00000544344 J3QR06 171 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 SH2D1BO14796 132 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 NFYBP25208 207 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 RBP2P50120 134 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 EFNB1P98172 346 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 HES1Q14469 280 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 PNLIPRP3Q17RR3 467 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 ZNF260Q3ZCT1 412 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 Q6P435 159 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 MEPCEQ7L2J0 689 aaKnown RBP12.1□□□□□ -0.47
CD4-212ENST00000544344 LEAP2Q969E1 77 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
CD4-212ENST00000544344 ZNF556Q9HAH1 456 aa12.1□□□□□ -0.47
CD4-212ENST00000544344 HYDINQ4G0P3 5121 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 ZNF670-ZNF695F2Z2N8 137 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 M0R129 80 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 AP4M1O00189 453 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
CD4-212ENST00000544344 CCRL2O00421 344 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 GPR12P47775 334 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 CRISP1P54107 249 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 ATP1B3P54709 279 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 MTCP1P56278 107 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 CFHR3Q02985 330 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 PDZK1IP1Q13113 114 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 FOXE3Q13461 319 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 DOC2BQ14184 412 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 EBI3Q14213 229 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 KRBOX4Q5JUW0 171 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 PRSS35Q8N3Z0 413 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
CD4-212ENST00000544344 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 TEX12Q9BXU0 123 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 FAM107BQ9H098 131 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 ING3Q9NXR8 418 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 PSG11Q9UQ72 335 aa12.09□□□□□ -0.47
CD4-212ENST00000544344 AMMECR1Q9Y4X0 333 aaPredicted RBP12.09□□□□□ -0.47
CD4-212ENST00000544344 KDM4BO94953 1096 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 CYB5AP00167 134 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 SERPINA3P01011 423 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 ANXA8P13928 327 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 GPR50Q13585 617 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 ATXN7L3Q14CW9 347 aaPredicted RBP12.08□□□□□ -0.48
CD4-212ENST00000544344 CXorf66Q5JRM2 361 aaPredicted RBP12.08□□□□□ -0.48
CD4-212ENST00000544344 RDH10Q8IZV5 341 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 OR8H3Q8N146 312 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 ARHGAP24Q8N264 748 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 Q8N6K4 173 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 YIPF7Q8N8F6 280 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 CANT1Q8WVQ1 401 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 PP6455Q8WZ26 134 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 ABCG5Q9H222 651 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 LINC00574Q9H8X3 128 aa12.08□□□□□ -0.48
CD4-212ENST00000544344 LOC107986453A0A1B0GWG9 222 aa12.07□□□□□ -0.48
CD4-212ENST00000544344 KRT8P05787 483 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms