RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	FAM90A15P	P0C7V4	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A13P	P0C7W8	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A14P	P0C7W9	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A24P	P0C7X0	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	GZMK	P49863	264 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	SCAND1	P57086	179 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	RBM39	Q14498	530 aa	Known RBP	8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM249	Q2WGJ8	235 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	CD276	Q5ZPR3	534 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	CYB5R2	Q6BCY4	276 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF841	Q6ZN19	808 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545		Q6ZTK2	550 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FGFRL1	Q8N441	504 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	LINC01356	Q8N9X3	169 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR4M1	Q8NGD0	313 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	DYNC2LI1	Q8TCX1	351 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	PTX4	Q96A99	478 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	POM121	Q96HA1	1249 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	TM2D1	Q9BX74	207 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM234A	Q9H0X4	552 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	CCDC59	Q9P031	241 aa	Known RBP	8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF581	Q9P0T4	197 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545		A0A096LNT2	108 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545		A0A0A6YYD4	124 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545		A0A1W2PQ09	198 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	UBE2QL1	A1L167	161 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545		A6NHS1	94 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM25A	B3EWG3	89 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM25C	B3EWG5	89 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM25G	B3EWG6	89 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545		B4DSR2	109 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	MGST3	O14880	152 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	GPR37	O15354	613 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	SOCS1	O15524	211 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF737	O75373	536 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	ECD	O95905	644 aa	Predicted RBP	8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	TGFA	P01135	160 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	CD99	P14209	185 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	LMO1	P25800	156 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZFP36	P26651	326 aa	Known RBP	8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR3A1	P47881	315 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	MRPS15	P82914	257 aa	Known RBP	8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	ATXN7L3	Q14CW9	347 aa	Predicted RBP	8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	KRBOX4	Q5JUW0	171 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	FOXB2	Q5VYV0	432 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	SPNS3	Q6ZMD2	512 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	C17orf107	Q6ZR85	190 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	BTN2A1	Q7KYR7	527 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM185A	Q8N0U4	392 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR8H2	Q8N162	312 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	DTX3	Q8N9I9	347 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR10R2	Q8NGX6	335 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	MCFD2	Q8NI22	146 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	RAB3C	Q96E17	227 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	S100A16	Q96FQ6	103 aa	Known RBP	8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAAP24	Q9BTP7	215 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	C6orf62	Q9GZU0	229 aa	Predicted RBP	8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	IFT22	Q9H7X7	185 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	DIABLO	Q9NR28	239 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	ETAA1	Q9NY74	926 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	CREBBP	Q92793	2442 aa		8.43	□□□□□ -1.06
CPSF7-221	ENST00000543545	PDZD2	O15018	2839 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRAV18	A0A075B6X5	111 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	MEX3A	A1L020	520 aa	Known RBP	8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	HPGDS	O60760	199 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	SCGN	O76038	276 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	MSMB	P08118	114 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	INHBB	P09529	407 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	IGHV4-31	P0DP07	118 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	CHAT	P28329	748 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	KCNJ3	P48549	501 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	RPL31	P62899	125 aa	Known RBP	8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	AES	Q08117	197 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	DYNC1I2	Q13409	638 aa	Known RBP	8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	UBE2NL	Q5JXB2	153 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	SIGIRR	Q6IA17	410 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	BTNL3	Q6UXE8	466 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	C6orf201	Q7Z4U5	140 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRAPPC6B	Q86SZ2	158 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	CMTM4	Q8IZR5	234 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM89B	Q8N5H3	189 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	TPRX1	Q8N7U7	411 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	ARHGAP5-AS1	Q96IT6	56 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	C18orf12	Q96KH6	178 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	COX4I2	Q96KJ9	171 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	SHARPIN	Q9H0F6	387 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZMAT3	Q9HA38	289 aa	Known RBP	8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	CHMP1A	Q9HD42	196 aa	Predicted RBP	8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	ADAM30	Q9UKF2	790 aa		8.42	□□□□□ -1.06
CPSF7-221	ENST00000543545	MED13L	Q71F56	2210 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	MEIKIN	A0A087WXM9	373 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRBV23-1	A0A0A0MS06	115 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRAV20	A0A0B4J274	112 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	PPIAL4C	A0A0B4J2A2	164 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545		A0A1W2PPH5	198 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	hADV38S2	A0JD32	116 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM30CP	A0ZSE6	113 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	C22orf46	C9J442	243 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	RAB27B	O00194	218 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	CTDSP2	O14595	271 aa		8.41	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms