RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PLA1AQ53H76 456 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 UTF1Q5T230 341 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 MINOS1Q5TGZ0 78 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TTC23Q5W5X9 447 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HEPN1Q6WQI6 88 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CHST4Q8NCG5 386 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR51T1Q8NGJ9 327 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR4P4Q8NGL7 312 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TSEN15Q8WW01 171 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GGHQ92820 318 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FOXRED1Q96CU9 486 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CDCA4Q9BXL8 241 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 RANBP3Q9H6Z4 567 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 NEK6Q9HC98 313 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 C8orf4Q9NR00 106 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TAS2R4Q9NYW5 299 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TCF19Q9Y242 345 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 MINOS1-NBL1R4GNA1 71 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TRAV24A0A0B4J272 114 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GABRPO00591 440 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DEGS1O15121 323 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 IGLV1-47P01700 117 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ALDOBP05062 364 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 RAB3AP20336 220 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 RPS11P62280 158 aaKnown RBP eCLIP10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 RCN1Q15293 331 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FAM189A2Q15884 450 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 C17orf58Q2M2W7 97 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DMKNQ6E0U4 476 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 Q8N2B8 174 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GPR148Q8TDV2 347 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 WIPF2Q8TF74 440 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FBLIM1Q8WUP2 373 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CYGBQ8WWM9 190 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CFHR4Q92496 578 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 STMN2Q93045 179 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 NKX3-1Q99801 234 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CLEC7AQ9BXN2 247 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PPIL3Q9H2H8 161 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 MMP27Q9H306 513 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ZNF702PQ9H963 129 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TAS2R3Q9NYW6 316 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FOXJ3Q9UPW0 622 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ZNF281Q9Y2X9 895 aa10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 EXOSC1Q9Y3B2 195 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TRBV5-5A0A0J9YX44 114 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CASQ2O14958 399 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GPX5O75715 221 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ZNF44P15621 663 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 IGFBP3P17936 291 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CDK2P24941 298 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CD34P28906 385 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 BDH1Q02338 343 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PAX5Q02548 391 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SCN1BQ07699 218 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DYNC1I2Q13409 638 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OGFRL1Q5TC84 451 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 Q6ZS46 218 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DHRSXQ8N5I4 330 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR13C5Q8NGS8 318 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR52N1Q8NH53 320 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TNFAIP8L1Q8WVP5 186 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GHSRQ92847 366 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TMEM106AQ96A25 262 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SMIM19Q96E16 107 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TMEM80Q96HE8 168 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PGLYRP3Q96LB9 341 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 NCOR1P1Q9H4R4 102 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LINC00574Q9H8X3 128 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SERTAD4Q9NUC0 356 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ZNF581Q9P0T4 197 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HILPDAQ9Y5L2 63 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HSPE1-MOB4S4R3N1 261 aa10.54□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TET2Q6N021 2002 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 A0A087X0M5 115 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TRGV10A0A0A0MS01 117 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 A0A1B0GX30 115 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 IRGMA1A4Y4 181 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FUOMA2VDF0 154 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TSPAN15O95858 294 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PTGFRP43088 359 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ST3GAL4Q11206 333 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 IL13RA2Q14627 380 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ATXN7L3Q14CW9 347 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HERPUD1Q15011 391 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FBLN7Q53RD9 439 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 KRBOX4Q5JUW0 171 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 C11orf88Q6PI97 169 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SATL1Q86VE3 508 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TMEM219Q86XT9 240 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms