RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 EXT1Q16394 746 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 RNF212Q495C1 297 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 OR2G3Q8NGZ4 309 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 SCGB3A2Q96PL1 93 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 CRLF2Q9HC73 371 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 A0A1W2PR80 420 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 TAAR5O14804 337 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 CYC1P08574 325 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 MTCP1P56278 107 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 CLDN15P56746 228 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 DEFA6Q01524 100 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 FAM27BQ5VT28 67 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 GGNQ86UU5 652 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 Q8WTZ3 238 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 RAB39BQ96DA2 213 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 AK3Q9UIJ7 227 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 SLC7A11Q9UPY5 501 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 KIAA2026Q5HYC2 2103 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 DOCK7Q96N67 2140 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 NSG1A0A0A6YYJ2 146 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 SYNGR3O43761 229 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 FABP4P15090 132 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 S100A2P29034 98 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 TAS2R46P59540 309 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 ERVFRD-1P60508 538 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 UBE2KP61086 200 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 IZUMO4Q1ZYL8 232 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 MAML2Q8IZL2 1156 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 PP6455Q8WZ26 134 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 KIAA1549Q9HCM3 1950 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 H3BQ15 152 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 CBR3O75828 277 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 VAMP5O95183 116 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 IFNA17P01571 189 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 HTR5AP47898 357 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 SPIN3Q5JUX0 258 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 NSUN5P2Q63ZY6 315 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 SLC22A25Q6T423 547 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 OR1J1Q8NGS3 322 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 Q96M66 194 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 RBM14Q96PK6 669 aaKnown RBP10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 ALKBH3Q96Q83 286 aaPredicted RBP10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 TMPRSS5Q9H3S3 457 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 BORCS7-ASMTA0A0B4J1R7 106 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 F10P00742 488 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF728P0DKX0 622 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 MRPS34P82930 218 aaKnown RBP10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 FAM3AP98173 230 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 GAMTQ14353 236 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 CYB561D1Q8N8Q1 229 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF716A6NP11 495 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 GEMIN2O14893 280 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 SSSCA1O60232 199 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 SOD3P08294 240 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 B4GALT1P15291 398 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 SURF2Q15527 256 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 DEPPQ9NTK1 212 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 IGKV1-12A0A0C4DH73 117 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 IGKV1D-12P01611 117 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 MMP9P14780 707 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 RND3P61587 244 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 DLK1P80370 383 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 UBAC2Q8NBM4 344 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 ANXA10Q9UJ72 324 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 KCNIP3Q9Y2W7 256 aa10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-208ENST00000539506 PINLYPA6NC86 204 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 NKX2-6A6NCS4 301 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 CRYM-AS1A6NIL9 109 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 LRRC3CA6NJW4 275 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 SERPINE3A8MV23 424 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 ATP6V0CP27449 155 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 CHATP28329 748 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 P4HTMQ9NXG6 502 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 HSF4Q9ULV5 492 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 LOC400499M0QZD8 3231 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 C9J4A7 227 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 NR2C1P13056 603 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF32P17041 273 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 EPHA1P21709 976 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 RAC3P60763 192 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 RSU1Q15404 277 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 CYB5R2Q6BCY4 276 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 HEPN1Q6WQI6 88 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 Q6ZPA2 131 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 PPP1R32Q7Z5V6 425 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 SPTSSAQ969W0 71 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 CDX2Q99626 313 aaPredicted RBP10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 E5RGE8 158 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 CXCL13O43927 109 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 HLA-HP01893 362 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 HOXA6P31267 233 aa10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 FGF8P55075 233 aaPredicted RBP10.84□□□□□ -0.67
SFSWAP-208ENST00000539506 EIF3IQ13347 325 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms