RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
CDC27-209ENST00000532893 GSTK1Q9Y2Q3 226 aa11.3□□□□□ -0.6
CDC27-209ENST00000532893 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 ODAMA1E959 279 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 AP4M1O00189 453 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 GATBO75879 557 aaKnown RBP11.29□□□□□ -0.6
CDC27-209ENST00000532893 RPP14O95059 124 aaKnown RBP11.29□□□□□ -0.6
CDC27-209ENST00000532893 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 OSMP13725 252 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 CCL1P22362 96 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 POU3F4P49335 361 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 ACTR3P61158 418 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 SCN1BQ07699 218 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 GPR50Q13585 617 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 C17orf58Q2M2W7 97 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
CDC27-209ENST00000532893 SPIN3Q5JUX0 258 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 TMEM179BQ7Z7N9 219 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 LEAP2Q969E1 77 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 EXOSC4Q9NPD3 245 aaKnown RBP11.29□□□□□ -0.6
CDC27-209ENST00000532893 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
CDC27-209ENST00000532893 MRM2Q9UI43 246 aaKnown RBP11.29□□□□□ -0.6
CDC27-209ENST00000532893 SIRT4Q9Y6E7 314 aaPredicted RBP11.29□□□□□ -0.6
CDC27-209ENST00000532893 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
CDC27-209ENST00000532893 J3QR06 171 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 SYT7O43581 403 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 CYB5AP00167 134 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 SERPINA3P01011 423 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 GPR12P47775 334 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 ATP1B3P54709 279 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 FOXE3Q13461 319 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 SPATS1Q496A3 300 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 KRBOX4Q5JUW0 171 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 COQ2Q96H96 371 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 KIRREL1Q96J84 757 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 CNN2Q99439 309 aaKnown RBP11.28□□□□□ -0.6
CDC27-209ENST00000532893 TEX12Q9BXU0 123 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 HMG20AQ9NP66 347 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 AMMECR1Q9Y4X0 333 aaPredicted RBP11.28□□□□□ -0.6
CDC27-209ENST00000532893 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
CDC27-209ENST00000532893 HYDINQ4G0P3 5121 aa11.27□□□□□ -0.6
CDC27-209ENST00000532893 KBTBD11-OT1A0A1B0GTJ5 212 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 ZNF729A6NN14 1252 aaPredicted RBP11.27□□□□□ -0.61
CDC27-209ENST00000532893 CCRL2O00421 344 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 CST1P01037 141 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 ELANEP08246 267 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 RBP2P50120 134 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 INSL3P51460 131 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 MTCP1P56278 107 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 MADCAM1Q13477 382 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 FHL3Q13643 280 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 C16orf89Q6UX73 402 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
CDC27-209ENST00000532893 SLC35F2Q8IXU6 374 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 RNF152Q8N8N0 203 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 GON7Q9BXV9 100 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 ZNF556Q9HAH1 456 aa11.27□□□□□ -0.61
CDC27-209ENST00000532893 CGB3P0DN86 165 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 CGB7P0DN87 165 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 ZNF44P15621 663 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 PRKACGP22612 351 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 RAB7AP51149 207 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 BNIP1Q12981 228 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 PDZK1IP1Q13113 114 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 GK3PQ14409 553 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 FAM27D1Q5T7N8 215 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 DHFR2Q86XF0 187 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 HS3ST5Q8IZT8 346 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 OR8H3Q8N146 312 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 YIPF7Q8N8F6 280 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 RNFT2Q96EX2 444 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 ADI1Q9BV57 179 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 PPIL3Q9H2H8 161 aaKnown RBP11.26□□□□□ -0.61
CDC27-209ENST00000532893 ARL8BQ9NVJ2 186 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 PSG11Q9UQ72 335 aa11.26□□□□□ -0.61
CDC27-209ENST00000532893 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 IGKV1-9A0A0C4DH69 117 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 IGKV1-12A0A0C4DH73 117 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 ZNF670-ZNF695F2Z2N8 137 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 GNGT2O14610 69 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 IGKV1D-12P01611 117 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 HCKP08631 526 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 GNG10P50151 68 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 EBI3Q14213 229 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 ATXN7L3Q14CW9 347 aaPredicted RBP11.25□□□□□ -0.61
CDC27-209ENST00000532893 LTC4SQ16873 150 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 Q8N9W7 124 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 HAVCR2Q8TDQ0 301 aa11.25□□□□□ -0.61
CDC27-209ENST00000532893 RFT1Q96AA3 541 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms