RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GK3PQ14409 553 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 DEFB136Q30KP8 78 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 FAM98BQ52LJ0 330 aaKnown RBP7.07□□□□□ -1.28
VPS11-203ENST00000529545 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 FAM27D1Q5T7N8 215 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 ZFAND6Q6FIF0 208 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 ZDHHC13Q8IUH4 622 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 SBSPONQ8IVN8 264 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 DRAM1Q8N682 238 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 BBS1Q8NFJ9 593 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 OR9G1Q8NH87 305 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 CORO2AQ92828 525 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 ADI1Q9BV57 179 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 TTTY10Q9BZA0 68 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 MAGIXQ9H6Y5 334 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 ZNF556Q9HAH1 456 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 KRT84Q9NSB2 600 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 NDE1Q9NXR1 346 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 SCOCQ9UIL1 159 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 R4GMQ9 66 aa7.07□□□□□ -1.28
VPS11-203ENST00000529545 TRBV2A0A0J9YWF9 115 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 A0A1B0GTI1 187 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 ZNF729A6NN14 1252 aaPredicted RBP7.06□□□□□ -1.28
VPS11-203ENST00000529545 SYT7O43581 403 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 PRKACAP17612 351 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 SLC2A5P22732 501 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 GLIPR1P48060 266 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 RBP2P50120 134 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 MNAT1P51948 309 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 ATP1B3P54709 279 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 AESQ08117 197 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 BNIP1Q12981 228 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 FOXE3Q13461 319 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 MADCAM1Q13477 382 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 GPR50Q13585 617 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 ZNF146Q15072 292 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 UBE2V2Q15819 145 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 ZNF322Q6U7Q0 402 aaPredicted RBP7.06□□□□□ -1.28
VPS11-203ENST00000529545 C16orf89Q6UX73 402 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 CCDC54Q8NEL0 328 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 CNN2Q99439 309 aaKnown RBP7.06□□□□□ -1.28
VPS11-203ENST00000529545 APOL4Q9BPW4 351 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 EXOSC4Q9NPD3 245 aaKnown RBP7.06□□□□□ -1.28
VPS11-203ENST00000529545 RBFOX1Q9NWB1 397 aaKnown RBP7.06□□□□□ -1.28
VPS11-203ENST00000529545 ACTR3BQ9P1U1 418 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 IL36RNQ9UBH0 155 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 KIAA2026Q5HYC2 2103 aa7.06□□□□□ -1.28
VPS11-203ENST00000529545 IGKV1-27A0A075B6S5 117 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 A0A087X0M5 115 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 A0A1B0GX30 115 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 ODAMA1E959 279 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 NCBP2LA6PVI3 153 aaKnown RBP7.05□□□□□ -1.28
VPS11-203ENST00000529545 PRR32B1ATL7 298 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 ZNF670-ZNF695F2Z2N8 137 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 CCRL2O00421 344 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 GNGT2O14610 69 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 ENTPD6O75354 484 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 SRSF10O75494 262 aaKnown RBP7.05□□□□□ -1.28
VPS11-203ENST00000529545 OR2H2O95918 312 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 IGKV1D-33P01593 117 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 IGKV1-33P01594 117 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 ELANEP08246 267 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 OSMP13725 252 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 BCL3P20749 454 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 GDNFP39905 211 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 NPBWR2P48146 333 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 POU3F4P49335 361 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 RAB7AP51149 207 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 CXCR4P61073 352 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 CDK5Q00535 292 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 SCN1BQ07699 218 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 ODF4Q2M2E3 257 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 KRBOX4Q5JUW0 171 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 Q6ZSR3 168 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 DEFB107AQ8IZN7 70 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 OR8H3Q8N146 312 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 HAVCR2Q8TDQ0 301 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 ISOC1Q96CN7 298 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 RNFT2Q96EX2 444 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 MNTQ99583 582 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 CHST5Q9GZS9 411 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 CHCHD3Q9NX63 227 aaKnown RBP7.05□□□□□ -1.28
VPS11-203ENST00000529545 ING3Q9NXR8 418 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 OR6C3Q9NZP0 311 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 H2AFY2Q9P0M6 372 aaPredicted RBP7.05□□□□□ -1.28
VPS11-203ENST00000529545 NKX1-2Q9UD57 310 aaPredicted RBP7.05□□□□□ -1.28
VPS11-203ENST00000529545 COPS3Q9UNS2 423 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 GSTK1Q9Y2Q3 226 aa7.05□□□□□ -1.28
VPS11-203ENST00000529545 KBTBD11-OT1A0A1B0GTJ5 212 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 H3BSH0 61 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 J3QR06 171 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 MPZL2O60487 215 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 RPP14O95059 124 aaKnown RBP7.04□□□□□ -1.28
VPS11-203ENST00000529545 CST1P01037 141 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 KRT8P05787 483 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 OR8U8P0C7N1 319 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 FRMD6-AS1P0C7T7 363 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 OCM2P0CE71 109 aa7.04□□□□□ -1.28
VPS11-203ENST00000529545 OCMP0CE72 109 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms