RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC33A1O00400 549 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 GEMIN2O14893 280 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 DHHO43323 396 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF239Q16600 458 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 RHBDD2Q6NTF9 364 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 EDARADDQ8WWZ3 215 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ABHD14AQ9BUJ0 271 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 DECR2Q9NUI1 292 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 TNRC6BQ9UPQ9 1833 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 SMG1Q96Q15 3661 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 RBFOX3A6NFN3 312 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 MSTNO14793 375 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 ONECUT2O95948 504 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 LCATP04180 440 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 CD59P13987 128 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 S100A2P29034 98 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 UBE2KP61086 200 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 EWSR1Q01844 656 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN1-208ENST00000527323 PIGYQ3MUY2 71 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 SPIN3Q5JUX0 258 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 BATF2Q8N1L9 274 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 C18orf12Q96KH6 178 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 GGACTQ9BVM4 153 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF286AQ9HBT8 521 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 TINAGQ9UJW2 476 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 A0A1W2PNU3 283 aaPredicted RBP10.84□□□□□ -0.67
CAPN1-208ENST00000527323 EIF3IQ13347 325 aaKnown RBP10.84□□□□□ -0.67
CAPN1-208ENST00000527323 FBXL14Q8N1E6 418 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 OR2C3Q8N628 320 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 ULBP2Q9BZM5 246 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 MAGT1Q9H0U3 335 aa10.84□□□□□ -0.67
CAPN1-208ENST00000527323 UBE2J1Q9Y385 318 aaPredicted RBP10.84□□□□□ -0.67
CAPN1-208ENST00000527323 IGLV3-1P01715 115 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 DTYMKP23919 212 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 VAMP2P63027 116 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 CCDC71LQ8N9Z2 235 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 OR14L1PQ8NHC6 308 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
CAPN1-208ENST00000527323 MSI2Q96DH6 328 aaKnown RBP10.83□□□□□ -0.68
CAPN1-208ENST00000527323 MALSU1Q96EH3 234 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 PFDN5Q99471 154 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF442Q9H7R0 627 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 NKX2-6A6NCS4 301 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 H3BQ15 152 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 HSPA12AO43301 675 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 IGHV2-70P01814 119 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 RBP2P50120 134 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 TCF15Q12870 199 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF266Q14584 549 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 RAET1LQ5VY80 246 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 CARFQ8N187 725 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 HPSE2Q8WWQ2 592 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 SPSB1Q96BD6 273 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 UNKLQ9H9P5 680 aaKnown RBP10.83□□□□□ -0.68
CAPN1-208ENST00000527323 TMED3Q9Y3Q3 217 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 PIEZO1Q92508 2521 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 K7N7A8 449 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 FOSL1P15407 271 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 AADACP22760 399 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 NKX2-1P43699 371 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-208ENST00000527323 CFAP161Q6P656 301 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 HEPN1Q6WQI6 88 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF695Q8IW36 515 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM217Q8N7C4 229 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 NAT6Q93015 286 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-208ENST00000527323 PAPOLGQ9BWT3 736 aaKnown RBP10.83□□□□□ -0.68
CAPN1-208ENST00000527323 BCO1Q9HAY6 547 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 HSF4Q9ULV5 492 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 SLC7A11Q9UPY5 501 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ST3GAL6Q9Y274 331 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 SHANK1Q9Y566 2161 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 ATRXP46100 2492 aa10.83□□□□□ -0.68
CAPN1-208ENST00000527323 NXPH3O95157 252 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 FBP1P09467 338 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 CNN3Q15417 329 aaKnown RBP10.82□□□□□ -0.68
CAPN1-208ENST00000527323 P4HA3Q7Z4N8 544 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 OR10AD1Q8NGE0 317 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 RAB39BQ96DA2 213 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 SPACA9Q96E40 222 aaPredicted RBP10.82□□□□□ -0.68
CAPN1-208ENST00000527323 TP53RKQ96S44 253 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 RASL10BQ96S79 203 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 LIPGQ9Y5X9 500 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 IGKV1-27A0A075B6S5 117 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 WRBO00258 174 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 SSSCA1O60232 199 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 CST7O76096 145 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 RND3P61587 244 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 MALLQ13021 153 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 SRSF6Q13247 344 aaKnown RBP10.82□□□□□ -0.68
CAPN1-208ENST00000527323 OR2B11Q5JQS5 317 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 RABEPKQ7Z6M1 372 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 OSR2Q8N2R0 312 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 LRTM2Q8N967 370 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 NTNG2Q96CW9 530 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms