RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 PAIP2BQ9ULR5 123 aaKnown RBP3.25□□□□□ -1.89
COPB1-204ENST00000526191 RNF11Q9Y3C5 154 aa3.25□□□□□ -1.89
COPB1-204ENST00000526191 TIMM22Q9Y584 194 aa3.25□□□□□ -1.89
COPB1-204ENST00000526191 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 IGHV1-18A0A0C4DH31 117 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 SERTM2A0A1B0GWG4 89 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 HELTA6NFD8 242 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 TRAF3IP2O43734 574 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 TBX19O60806 448 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CIB2O75838 187 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 SNAPINO95295 136 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 FGGP02679 453 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 GLAP06280 429 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 IDO1P14902 403 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 PGAM1P18669 254 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CSNK2A2P19784 350 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 PRTN3P24158 256 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CALCRP30988 508 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 GABRA3P34903 492 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CBX5P45973 191 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 GPR6P46095 362 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 P2RY1P47900 373 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 GDI2P50395 445 aaKnown RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 PPT1P50897 306 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 DAP3P51398 398 aaKnown RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 IDH3GP51553 393 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 LCN2P80188 198 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 EBI3Q14213 229 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CASP8Q14790 479 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 ARL6IP1Q15041 203 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 PLPPR5Q32ZL2 321 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 KLF17Q5JT82 389 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 CCNJQ5T5M9 372 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 TTC23Q5W5X9 447 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 TMEM107Q6UX40 140 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 ACOT7LQ6ZUV0 252 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 SYT14Q8NB59 555 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 OR13C2Q8NGS9 318 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 OR51F2Q8NH61 342 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 MAIP1Q8WWC4 291 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 YIPF5Q969M3 257 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 TM4SF18Q96CE8 201 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 WDR34Q96EX3 536 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CERS2Q96G23 380 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 KCNS3Q9BQ31 491 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 NIPSNAP3BQ9BS92 247 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 EBPLQ9BY08 206 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 SLC25A39Q9BZJ4 359 aaPredicted RBP3.24□□□□□ -1.89
COPB1-204ENST00000526191 RAB1BQ9H0U4 201 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 PALMDQ9NP74 551 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 C8orf4Q9NR00 106 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 GIN1Q9NXP7 522 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 IL36GQ9NZH8 169 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 OPTCQ9UBM4 332 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 ZNF639Q9UID6 485 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 CES1P1Q9UKY3 287 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 ZNF780BQ9Y6R6 833 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 COL7A1Q02388 2944 aa3.24□□□□□ -1.89
COPB1-204ENST00000526191 DOCK11Q5JSL3 2073 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 IGHV3OR16-13A0A075B7E8 117 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 MIF4GDA9UHW6 222 aaKnown RBP3.23□□□□□ -1.89
COPB1-204ENST00000526191 TRDCB7Z8K6 153 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 SCAMP2O15127 329 aaKnown RBP3.23□□□□□ -1.89
COPB1-204ENST00000526191 OR10H3O60404 316 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 OXSR1O95747 527 aaPredicted RBP3.23□□□□□ -1.89
COPB1-204ENST00000526191 OTCP00480 354 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 IGHG4P01861 327 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 IL3P08700 152 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 RPA2P15927 270 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 COX5AP20674 150 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 PCMT1P22061 227 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 CTRLP40313 264 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 TSPAN5P62079 268 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 CBX1P83916 185 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 LIPEQ05469 1076 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 IL24Q13007 206 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 SLC9A3R2Q15599 337 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 GABRA6Q16445 453 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 SPANXN3Q5MJ09 141 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 CPTPQ5TA50 214 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 C1orf146Q5VVC0 180 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 FBXW9Q5XUX1 488 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 SLC48A1Q6P1K1 146 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 DEGS2Q6QHC5 323 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 METAP1DQ6UB28 335 aaPredicted RBP3.23□□□□□ -1.89
COPB1-204ENST00000526191 CASP12Q6UXS9 341 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 AKAP14Q86UN6 197 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 LRRC34Q8IZ02 419 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 CLEC4FQ8N1N0 589 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 OR2L13Q8N349 312 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 ZNF786Q8N393 782 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 GTPBP8Q8N3Z3 284 aaPredicted RBP3.23□□□□□ -1.89
COPB1-204ENST00000526191 ANKFN1Q8N957 763 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 SUMF2Q8NBJ7 301 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 OR1F12Q8NHA8 337 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 ZFP90Q8TF47 636 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 DYDC1Q8WWB3 177 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 UBE2E3Q969T4 207 aa3.23□□□□□ -1.89
COPB1-204ENST00000526191 CPNE4Q96A23 557 aaPredicted RBP3.23□□□□□ -1.89
COPB1-204ENST00000526191 LRRC58Q96CX6 371 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms