RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 DUX4L7P0CJ90 424 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 SELLP14151 372 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 FOSL1P15407 271 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 RAB6AP20340 208 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 EPHA1P21709 976 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 GABRR1P24046 479 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 LMO1P25800 156 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUSP1P28562 367 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 SEC61A1P61619 476 aaKnown RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 RPS27AP62979 156 aaKnown RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 QRFPP83859 136 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 COL10A1Q03692 680 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 C2orf76Q3KRA6 126 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 IDNKQ5T6J7 187 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 WDR25Q64LD2 544 aaPredicted RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 OR10K2Q6IF99 312 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 Q6P435 159 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4L9Q6RFH8 374 aaPredicted RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF841Q6ZN19 808 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 OR8H2Q8N162 312 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 CIARTQ8N365 385 aaPredicted RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNRF1Q8ND25 227 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 MAPK1IP1LQ8NDC0 245 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 LGALS14Q8TCE9 139 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ST8SIA4Q92187 359 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 PTX4Q96A99 478 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 C1orf159Q96HA4 380 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 SNX22Q96L94 193 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 URM1Q9BTM9 101 aaKnown RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 TM2D1Q9BX74 207 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 SELENOIQ9C0D9 397 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 BANF2Q9H503 90 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 IFT22Q9H7X7 185 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 SPACA1Q9HBV2 294 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 NDUFA13Q9P0J0 144 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ABRACLQ9P1F3 81 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4Q9UBX2 424 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 OR5V1Q9UGF6 321 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 RSL24D1Q9UHA3 163 aaKnown RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 RAB22AQ9UL26 194 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 POLR3KQ9Y2Y1 108 aaPredicted RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ETV7Q9Y603 341 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 CEPT1Q9Y6K0 416 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 A0A0B4J203 849 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 PPIAL4CA0A0B4J2A2 164 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 KIAA1324LA8MWY0 1029 aaPredicted RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 K7N7A8 449 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SIRPB1O00241 398 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SLC33A1O00400 549 aaPredicted RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 MAST4O15021 2626 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 DEGS1O15121 323 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 PHF1O43189 567 aaPredicted RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 PSPNO60542 156 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 FCN3O75636 299 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 ECDO95905 644 aaPredicted RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 TFF1P04155 84 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 TK1P04183 234 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 CSN2P05814 226 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 MSMBP08118 114 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 CD99P14209 185 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 NDUFB7P17568 137 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SOX6P35712 828 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 KCNJ3P48549 501 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 RORCP51449 518 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SCN1BQ07699 218 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 DYNC1I2Q13409 638 aaKnown RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SPCS2Q15005 226 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 TAF9Q16594 264 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 PAN3Q58A45 887 aaKnown RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 CD276Q5ZPR3 534 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 C17orf107Q6ZR85 190 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 GDPD3Q7L5L3 318 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 LINC01356Q8N9X3 169 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 OR5D13Q8NGL4 314 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 AP3S1Q92572 193 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 MSI2Q96DH6 328 aaKnown RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 LPAR5Q9H1C0 372 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 PPA2Q9H2U2 334 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 CCDC59Q9P031 241 aaKnown RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 RCC2Q9P258 522 aaKnown RBP6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 SPATA2Q9UM82 520 aa6.29□□□□□ -1.4
HMGXB3-204ENST00000513318 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 TRAV24A0A0B4J272 114 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 TRAV20A0A0B4J274 112 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 FUOMA2VDF0 154 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 DPPA5A6NC42 116 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 METTL21EPA6NDL7 271 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 MGST3O14880 152 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 ENSAO43768 121 aaKnown RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 PDCD6O75340 191 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 SCGNO76038 276 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 PAHP00439 452 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 GLAP06280 429 aa6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF16P17020 682 aaPredicted RBP6.28□□□□□ -1.4
HMGXB3-204ENST00000513318 FUT3P21217 361 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms