RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZNF714Q96N38 554 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 RANBP3Q9H6Z4 567 aaPredicted RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 ZNF702PQ9H963 129 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 HMG20AQ9NP66 347 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 AMBNQ9NP70 447 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 TCF19Q9Y242 345 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 TBL2Q9Y4P3 447 aaKnown RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 A6NDX4 124 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 E9PI62 339 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 PRKACAP17612 351 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 ACTA2P62736 377 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 ACTG2P63267 376 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
LMNA-222ENST00000508500 HABP2Q14520 560 aaPredicted RBP13.07□□□□□ -0.32
LMNA-222ENST00000508500 HERPUD1Q15011 391 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 GRK1Q15835 563 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 SSX2Q16385 188 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 LHFPL2Q6ZUX7 228 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 GPR141Q7Z602 305 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 Q8IYB0 196 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 OR4C13Q8NGP0 309 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 OR13C9Q8NGT0 318 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 OR13D1Q8NGV5 346 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 MUL1Q969V5 352 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 MALSU1Q96EH3 234 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 OPALINQ96PE5 141 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 ACOT13Q9NPJ3 140 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 SERTAD4Q9NUC0 356 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 HHLA2Q9UM44 414 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 ERGIC3Q9Y282 383 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 LINC00312Q9Y6C7 94 aa13.07□□□□□ -0.32
LMNA-222ENST00000508500 NOTCH3Q9UM47 2321 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 hADV38S2A0JD32 116 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
LMNA-222ENST00000508500 SIRPB1O00241 398 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 KDM4BO94953 1096 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 ZNF20P17024 532 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 MYL12AP19105 171 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 PRKACBP22694 351 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 GABRR1P24046 479 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 GALEQ14376 348 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 FAM189A2Q15884 450 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 SYT6Q5T7P8 510 aaPredicted RBP13.06□□□□□ -0.32
LMNA-222ENST00000508500 Q6ZS46 218 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 ZNF367Q7RTV3 350 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 TMEM219Q86XT9 240 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 OR52I1Q8NGK6 324 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 OR5D18Q8NGL1 313 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 SPSB1Q96BD6 273 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 MRPL48Q96GC5 212 aaKnown RBP13.06□□□□□ -0.32
LMNA-222ENST00000508500 ALG8Q9BVK2 526 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 MND1Q9BWT6 205 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 GSTK1Q9Y2Q3 226 aa13.06□□□□□ -0.32
LMNA-222ENST00000508500 IGHV2-26A0A0B4J1V2 119 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 MGST3O14880 152 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 OR2H2O95918 312 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 LMO1P25800 156 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 ERP29P30040 261 aaKnown RBP13.05□□□□□ -0.32
LMNA-222ENST00000508500 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
LMNA-222ENST00000508500 GDNFP39905 211 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 C2orf68Q2NKX9 166 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 SPIN3Q5JUX0 258 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 Q6P435 159 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 LIAT1Q6ZQX7 453 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 Q8N2B8 174 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 ZNF676Q8N7Q3 588 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 OR13C3Q8NGS6 347 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 OR2T6Q8NHC8 308 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 WIPF2Q8TF74 440 aaPredicted RBP13.05□□□□□ -0.32
LMNA-222ENST00000508500 SGCDQ92629 289 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 NKX3-1Q99801 234 aaPredicted RBP13.05□□□□□ -0.32
LMNA-222ENST00000508500 BCL7BQ9BQE9 202 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 NPFFR1Q9GZQ6 430 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 COMMD4Q9H0A8 199 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 RAB18Q9NP72 206 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 ERVK13-1Q9NX77 482 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 SESN1Q9Y6P5 492 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 DNAH3Q8TD57 4116 aa13.05□□□□□ -0.32
LMNA-222ENST00000508500 ZFPL1O95159 310 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 CYB5AP00167 134 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 CSF1P09603 554 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 DYNLT3P51808 116 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 P2RX3P56373 397 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 ZP1P60852 638 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 DYNC1I2Q13409 638 aaKnown RBP13.04□□□□□ -0.32
LMNA-222ENST00000508500 NEDD8Q15843 81 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 UTF1Q5T230 341 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 Q6ZTK2 550 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 SYS1Q8N2H4 156 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 NANOGP1Q8N7R0 232 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 OR4P4Q8NGL7 312 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms