RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MALRD1Q5VYJ5 2156 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 KIR2DS1A0A191URI9 304 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 TMEM272A0A1B0GTI8 110 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 MPIG6BO95866 241 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 CSN2P05814 226 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 NDUFB7P17568 137 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 GATA3P23771 443 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 OR3A1P47881 315 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 SERPINB10P48595 397 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 SCN1BQ07699 218 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 PLA2G7Q13093 441 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 TAF9Q16594 264 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 SIGIRRQ6IA17 410 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 GLCCI1Q86VQ1 547 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 CROCCP3Q8IVE0 287 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 FAM89BQ8N5H3 189 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 RAB2BQ8WUD1 216 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 PTX4Q96A99 478 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 TMEM59Q9BXS4 323 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 LPAR5Q9H1C0 372 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
TCOF1-210ENST00000506767 DAPK2Q9UIK4 370 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 RPUSD1Q9UJJ7 312 aaKnown RBP10.62□□□□□ -0.71
TCOF1-210ENST00000506767 INSIG2Q9Y5U4 225 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 CEPT1Q9Y6K0 416 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
TCOF1-210ENST00000506767 A0A0B4J203 849 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 MGST3O14880 152 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 OR7C1O76099 320 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-210ENST00000506767 GABRR1P24046 479 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 ERP29P30040 261 aaKnown RBP10.61□□□□□ -0.71
TCOF1-210ENST00000506767 SCAND1P57086 179 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 PAX5Q02548 391 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 PAX8Q06710 450 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 BLMHQ13867 455 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 GRK1Q15835 563 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 METAP1DQ6UB28 335 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-210ENST00000506767 CLEC9AQ6UXN8 241 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 USP43Q70EL4 1123 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 SUMF2Q8NBJ7 301 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 PPP1R35Q8TAP8 253 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 SLC25A46Q96AG3 418 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 NUDT16L1Q9BRJ7 211 aaKnown RBP10.61□□□□□ -0.71
TCOF1-210ENST00000506767 NICN1Q9BSH3 213 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 BARHL1Q9BZE3 327 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 CHST6Q9GZX3 395 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 RAB22AQ9UL26 194 aa10.61□□□□□ -0.71
TCOF1-210ENST00000506767 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.6□□□□□ -0.711e-11■■■■□ 25.5
TCOF1-210ENST00000506767 TRBV23-1A0A0A0MS06 115 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 A0A0A6YYD4 124 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 A0A0G2JMP0 313 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 A0A0X1KG70 313 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 FOXI3A8MTJ6 420 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 ENSAO43768 121 aaKnown RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 GLAP06280 429 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 LIPFP07098 398 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 RAB6AP20340 208 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 KCNJ3P48549 501 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 IDNKQ5T6J7 187 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 DCAF12L2Q5VW00 463 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 Q71RC1 249 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 GDPD3Q7L5L3 318 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 OR4M2Q8NGB6 313 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 NDNFQ8TB73 568 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 H1FXQ92522 213 aaKnown RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 MRI1Q9BV20 369 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 DPCDQ9BVM2 203 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 TMPRSS13Q9BYE2 586 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 RBM38Q9H0Z9 239 aaKnown RBP10.6□□□□□ -0.71
TCOF1-210ENST00000506767 DCSTAMPQ9H295 470 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 PPA2Q9H2U2 334 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 SPACA1Q9HBV2 294 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 C19orf12Q9NSK7 152 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
TCOF1-210ENST00000506767 ABCA1O95477 2261 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 A8MV72 311 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-210ENST00000506767 H3BUI4 141 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 J3QLI3 93 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 PAHP00439 452 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 PPIAL4GP0DN37 164 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 SNRPBP14678 240 aaKnown RBP10.59□□□□□ -0.71
TCOF1-210ENST00000506767 FUT3P21217 361 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 CHATP28329 748 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 EFNB2P52799 333 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
TCOF1-210ENST00000506767 MEF2CQ06413 473 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-210ENST00000506767 SPCS2Q15005 226 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 PAN3Q58A45 887 aaKnown RBP10.59□□□□□ -0.71
TCOF1-210ENST00000506767 ATAD3CQ5T2N8 411 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 BPIFB2Q8N4F0 458 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 ISOC1Q96CN7 298 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 COQ2Q96H96 371 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 NCOR1P1Q9H4R4 102 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 YAE1D1Q9NRH1 226 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 ABRACLQ9P1F3 81 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 KCNS2Q9ULS6 477 aa10.59□□□□□ -0.71
TCOF1-210ENST00000506767 SPATA2Q9UM82 520 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms