RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 SNX22Q96L94 193 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 FAM192AQ9GZU8 254 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 HEXA-AS1Q9H8Q6 139 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 RHOFQ9HBH0 211 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 VPREB3Q9UKI3 123 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 GSTK1Q9Y2Q3 226 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 TRRAPQ9Y4A5 3859 aa20.65■□□□□ 0.9
PVT1-201ENST00000504719 hCG_1809904A0A1W2PP81 198 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 A0A1W2PPE2 198 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 A0A1W2PR64 198 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 A0A1W2PRV1 198 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 MAGEA13PA6NCF6 341 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 PIN1P1O15428 100 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 RRP9O43818 475 aaKnown RBP20.64■□□□□ 0.89
PVT1-201ENST00000504719 MAPK3P27361 379 aaPredicted RBP20.64■□□□□ 0.89
PVT1-201ENST00000504719 ZNF93P35789 620 aaPredicted RBP20.64■□□□□ 0.89
PVT1-201ENST00000504719 DLX6P56179 175 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 GABARAPL2P60520 117 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 GPR50Q13585 617 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 ACSM3Q53FZ2 586 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 SPIN3Q5JUX0 258 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 PXT1Q8NFP0 134 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 THRSPQ92748 146 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 ISYNA1Q9NPH2 558 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 GLS2Q9UI32 602 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 FOXJ3Q9UPW0 622 aa20.64■□□□□ 0.89
PVT1-201ENST00000504719 TMEM82A0PJX8 343 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 C17orf98A8MV24 154 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 PTGFRP43088 359 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 OR3A4PP47883 348 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 TBCEQ15813 527 aaPredicted RBP20.63■□□□□ 0.89
PVT1-201ENST00000504719 C17orf107Q6ZR85 190 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 GDPD3Q7L5L3 318 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 OR8H2Q8N162 312 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 OR5R1Q8NH85 324 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 WFDC12Q8WWY7 111 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 MEGF9Q9H1U4 602 aa20.63■□□□□ 0.89
PVT1-201ENST00000504719 MAS1P04201 325 aa20.62■□□□□ 0.89
PVT1-201ENST00000504719 EDDM3BP56851 147 aa20.62■□□□□ 0.89
PVT1-201ENST00000504719 MLLT11Q13015 90 aaPredicted RBP20.62■□□□□ 0.89
PVT1-201ENST00000504719 TPBGQ13641 420 aa20.62■□□□□ 0.89
PVT1-201ENST00000504719 UNQ9370/PRO34162Q6UXP9 181 aa20.62■□□□□ 0.89
PVT1-201ENST00000504719 LINC01006Q8NI28 216 aa20.62■□□□□ 0.89
PVT1-201ENST00000504719 MGLLQ99685 303 aa20.62■□□□□ 0.89
PVT1-201ENST00000504719 EXOSC4Q9NPD3 245 aaKnown RBP20.62■□□□□ 0.89
PVT1-201ENST00000504719 SH2D1BO14796 132 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 GABRR1P24046 479 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 MTNR1BP49286 362 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 BMXP51813 675 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 RSU1Q15404 277 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 Q6ZSV7 163 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 OR10K1Q8NGX5 313 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 TMEM203Q969S6 136 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 CHST6Q9GZX3 395 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 ACOT13Q9NPJ3 140 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 RNF114Q9Y508 228 aa20.61■□□□□ 0.89
PVT1-201ENST00000504719 SIRPB1O00241 398 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 CDRT1O95170 752 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 ZNF728P0DKX0 622 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 CPEP16870 476 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 COX7A1P24310 79 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 MEF2CQ06413 473 aaPredicted RBP20.6■□□□□ 0.89
PVT1-201ENST00000504719 SRSF4Q08170 494 aaKnown RBP20.6■□□□□ 0.89
PVT1-201ENST00000504719 FAM27D1Q5T7N8 215 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 ELP2Q6IA86 826 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 DHRS7BQ6IAN0 325 aaPredicted RBP20.6■□□□□ 0.89
PVT1-201ENST00000504719 ASCL4Q6XD76 172 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 ZNF782Q6ZMW2 699 aaPredicted RBP20.6■□□□□ 0.89
PVT1-201ENST00000504719 ZNF367Q7RTV3 350 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 SSX3Q99909 188 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 YTHDF1Q9BYJ9 559 aaKnown RBP20.6■□□□□ 0.89
PVT1-201ENST00000504719 ING4Q9UNL4 249 aa20.6■□□□□ 0.89
PVT1-201ENST00000504719 H3BUX3 64 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 PSPNO60542 156 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 MRPS14O60783 128 aaKnown RBP20.59■□□□□ 0.89
PVT1-201ENST00000504719 SC5DO75845 299 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 OR2H2O95918 312 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 RBP4P02753 201 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 RPS25P62851 125 aaKnown RBP20.59■□□□□ 0.89
PVT1-201ENST00000504719 EMX1Q04741 257 aaPredicted RBP20.59■□□□□ 0.89
PVT1-201ENST00000504719 SCN1BQ07699 218 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 GRK1Q15835 563 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 TCF23Q7RTU1 214 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 CEACAM19Q7Z692 300 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 JAGN1Q8N5M9 183 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 NR1H4Q96RI1 486 aaPredicted RBP20.59■□□□□ 0.89
PVT1-201ENST00000504719 S100A13Q99584 98 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 METTL9Q9H1A3 318 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 C16orf95Q9H693 158 aa20.59■□□□□ 0.89
PVT1-201ENST00000504719 MEX3AA1L020 520 aaKnown RBP20.58■□□□□ 0.89
PVT1-201ENST00000504719 HTR3BO95264 441 aa20.58■□□□□ 0.89
PVT1-201ENST00000504719 GP2P55259 537 aaKnown RBP20.58■□□□□ 0.89
PVT1-201ENST00000504719 KRTAP10-3P60369 221 aa20.58■□□□□ 0.89
PVT1-201ENST00000504719 EDDM3AQ14507 147 aa20.58■□□□□ 0.89
PVT1-201ENST00000504719 AANATQ16613 207 aa20.58■□□□□ 0.89
PVT1-201ENST00000504719 OR4S1Q8NGB4 309 aa20.58■□□□□ 0.89
PVT1-201ENST00000504719 CITED1Q99966 193 aa20.58■□□□□ 0.89
PVT1-201ENST00000504719 hADV38S2A0JD32 116 aa20.57■□□□□ 0.88
PVT1-201ENST00000504719 TSPAN9O75954 239 aa20.57■□□□□ 0.88
PVT1-201ENST00000504719 CLPXO76031 633 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms