RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RAB12Q6IQ22 244 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 RTN4RL2Q86UN3 420 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 PPP1R35Q8TAP8 253 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 PTX4Q96A99 478 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 MED30Q96HR3 178 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 NEDD4LQ96PU5 975 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-227ENST00000498056 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 LPAR2Q9HBW0 351 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 MAB21L2Q9Y586 359 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 A0A096LNT2 108 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 TRAV24A0A0B4J272 114 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 SOCS1O15524 211 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 PHF1O43189 567 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF737O75373 536 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 CHATP28329 748 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 OR3A1P47881 315 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 EDDM3BP56851 147 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 LMO4P61968 165 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
CPNE1-227ENST00000498056 MADCAM1Q13477 382 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 FAM189A2Q15884 450 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-227ENST00000498056 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 GDPD3Q7L5L3 318 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 LAX1Q8IWV1 398 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 OR8H2Q8N162 312 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 BPIFB2Q8N4F0 458 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 OR4S1Q8NGB4 309 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 DYRK2Q92630 601 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 SNX22Q96L94 193 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-227ENST00000498056 RCC2Q9P258 522 aaKnown RBP11.28□□□□□ -0.6
CPNE1-227ENST00000498056 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
CPNE1-227ENST00000498056 UBE2QL1A1L167 161 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 FAM157AC9JC47 383 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 TNFRSF13BO14836 293 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-227ENST00000498056 FCN3O75636 299 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 SCGNO76038 276 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 TK1P04183 234 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 WNT2P09544 360 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 NPY4RP50391 375 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 LCN2P80188 198 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 LOXL1Q08397 574 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-227ENST00000498056 CNPY1Q3B7I2 92 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-227ENST00000498056 SIGIRRQ6IA17 410 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 C17orf107Q6ZR85 190 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 C6orf201Q7Z4U5 140 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 TPRX1Q8N7U7 411 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 DTX3Q8N9I9 347 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 OR10R2Q8NGX6 335 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 IFT22Q9H7X7 185 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 PLEKHJ1Q9NW61 149 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 ADAM30Q9UKF2 790 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 PEX16Q9Y5Y5 336 aa11.27□□□□□ -0.61
CPNE1-227ENST00000498056 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 MCRIP1C9JLW8 97 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 K7N7A8 449 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 MGST3O14880 152 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 ZNF16P17020 682 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-227ENST00000498056 FUT3P21217 361 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 CDK2P24941 298 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 RBM39Q14498 530 aaKnown RBP11.26□□□□□ -0.61
CPNE1-227ENST00000498056 TMEM69Q5SWH9 247 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 CMTM4Q8IZR5 234 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 FAM185AQ8N0U4 392 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-227ENST00000498056 PLPPR1Q8TBJ4 325 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 RAB40AQ8WXH6 277 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 SULT4A1Q9BR01 284 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 ETAA1Q9NY74 926 aa11.26□□□□□ -0.61
CPNE1-227ENST00000498056 MAP1AP78559 2803 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 MEX3AA1L020 520 aaKnown RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 H3BUI4 141 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 RAB27BO00194 218 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 FOXH1O75593 365 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 APOA1P02647 267 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 HIST1H1DP16402 221 aaKnown RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 GNB3P16520 340 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 ELK1P19419 428 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 LMO1P25800 156 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 TALDO1P37837 337 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 GLP1RP43220 463 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 AESQ08117 197 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms