RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 LOC105371242A0A075B767 164 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 TRAV24A0A0B4J272 114 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 KIAA1324LA8MWY0 1029 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-223ENST00000494123 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 PSPNO60542 156 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ECDO95905 644 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-223ENST00000494123 PAHP00439 452 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 RAB6AP20340 208 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 SOX6P35712 828 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 OR3A1P47881 315 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 EDDM3BP56851 147 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 SCAND1P57086 179 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 GLCCI1Q86VQ1 547 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 SUMF2Q8NBJ7 301 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 OR4S1Q8NGB4 309 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 NEK7Q8TDX7 302 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 NEDD4LQ96PU5 975 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 NICN1Q9BSH3 213 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 DPCDQ9BVM2 203 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-223ENST00000494123 TM2D1Q9BX74 207 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 LPAR5Q9H1C0 372 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 NDUFA13Q9P0J0 144 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ZNF581Q9P0T4 197 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ETV7Q9Y603 341 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 MED13LQ71F56 2210 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 TRAV20A0A0B4J274 112 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 METTL21EPA6NDL7 271 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 MGST3O14880 152 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 FCN3O75636 299 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 VEGFCP49767 419 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 ATXN7L3Q14CW9 347 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-223ENST00000494123 C11orf91Q3C1V1 193 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 RAB12Q6IQ22 244 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 OR56B1Q8NGI3 324 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 AP3S1Q92572 193 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 PTX4Q96A99 478 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 TMEM186Q96B77 213 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
BRCA1-223ENST00000494123 BARHL1Q9BZE3 327 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 SHARPINQ9H0F6 387 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 RBM38Q9H0Z9 239 aaKnown RBP12.07□□□□□ -0.48
BRCA1-223ENST00000494123 PEX16Q9Y5Y5 336 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 ACANP16112 2415 aa12.07□□□□□ -0.48
BRCA1-223ENST00000494123 MALRD1Q5VYJ5 2156 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 FUOMA2VDF0 154 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 MCRIP1C9JLW8 97 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 ENSAO43768 121 aaKnown RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 ZNF182P17025 639 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 FUT3P21217 361 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 BLVRBP30043 206 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 EFNB2P52799 333 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 PLA2G7Q13093 441 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 RBM39Q14498 530 aaKnown RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 BTNL3Q6UXE8 466 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 BIVMQ86UB2 503 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 BPIFB2Q8N4F0 458 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 OR4M1Q8NGD0 313 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 DCTN5Q9BTE1 182 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 ING3Q9NXR8 418 aa12.06□□□□□ -0.48
BRCA1-223ENST00000494123 RCC2Q9P258 522 aaKnown RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 POLR3KQ9Y2Y1 108 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-223ENST00000494123 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.482e-7■■■■■ 43.6
BRCA1-223ENST00000494123 TRBV23-1A0A0A0MS06 115 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 A0A1W2PQ09 198 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 DPPA5A6NC42 116 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 C22orf46C9J442 243 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 ZNF701M0R085 212 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-223ENST00000494123 CD5LO43866 347 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 PDCD6O75340 191 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 CSN2P05814 226 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 KCNJ3P48549 501 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 DVL1P1P54792 670 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-223ENST00000494123 DCAF12L2Q5VW00 463 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 FAM185AQ8N0U4 392 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 OR5H6Q8NGV6 325 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 RAB40AQ8WXH6 277 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 ACOT12Q8WYK0 555 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 PHF21AQ96BD5 680 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 SMR3AQ99954 134 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 RPUSD1Q9UJJ7 312 aaKnown RBP12.05□□□□□ -0.48
BRCA1-223ENST00000494123 SPATA2Q9UM82 520 aa12.05□□□□□ -0.48
BRCA1-223ENST00000494123 A0A0A6YYD4 124 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 PPIAL4CA0A0B4J2A2 164 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 IGHV2-70DA0A0C4DH43 119 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 A0A0G2JMP0 313 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 A0A0X1KG70 313 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 SOCS1O15524 211 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 PPIAL4GP0DN37 164 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 P2RX3P56373 397 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
BRCA1-223ENST00000494123 AESQ08117 197 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms