RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 CRYGCP07315 174 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 IVLP07476 585 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 OR4Q2P0C623 313 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 HLA-GP17693 338 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 PRPS1L1P21108 318 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 S100A1P23297 94 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TEAD1P28347 426 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 LCN1P31025 176 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 HSPA13P48723 471 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 PSMB2P49721 201 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 BCAP31P51572 246 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 NKX2-5P52952 324 aaPredicted RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 HCCSP53701 268 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ACTBP60709 375 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 VBP1P61758 197 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 PSMC5P62195 406 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ACTG1P63261 375 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 S100A12P80511 92 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 RELAQ04206 551 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 SPAG1Q07617 926 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 C2orf54Q08AI8 447 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 IFFO1Q0D2I5 559 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ST3GAL4Q11206 333 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 COTL1Q14019 142 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 PMVKQ15126 192 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 STK38Q15208 465 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ELOCQ15369 112 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ZNF141Q15928 474 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CCDC153Q494R4 210 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ACTBL2Q562R1 376 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TTC32Q5I0X7 151 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CPTPQ5TA50 214 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 KCTD16Q68DU8 428 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ULK3Q6PHR2 472 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CCDC121Q6ZUS5 278 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TRMT10CQ7L0Y3 403 aaKnown RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 OR2W3Q7Z3T1 314 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TMEM144Q7Z5S9 345 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 AKAP14Q86UN6 197 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 COMTD1Q86VU5 262 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 SYCE1Q8N0S2 351 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CYP4Z2PQ8N1L4 340 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 Q8NDZ9 215 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 OR7G1Q8NGA0 311 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 OR4K2Q8NGD2 314 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 OR8J2Q8NGG1 315 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CLHC1Q8NHS4 586 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CMTM2Q8TAZ6 248 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TEX47Q8TBZ9 253 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ACTL9Q8TC94 416 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TNFRSF14Q92956 283 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TOP1MTQ969P6 601 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 MSANTD3Q96H12 275 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 SMIM8Q96KF7 97 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CCDC42Q96M95 316 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ZNF75AQ96N20 296 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 SPACA5Q96QH8 159 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 DHRS9Q9BPW9 319 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 C20orf144Q9BQM9 153 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 SHCBP1LQ9BZQ2 653 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 BLZF1Q9H2G9 400 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 XKR8Q9H6D3 395 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CYP3A43Q9HB55 503 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 RDH14Q9HBH5 336 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ABCB9Q9NP78 766 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 C8orf4Q9NR00 106 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 AGPAT3Q9NRZ7 376 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 EMC3Q9P0I2 261 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CYB5R1Q9UHQ9 305 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 SCML1Q9UN30 329 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 AP3M1Q9Y2T2 418 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 KLF13Q9Y2Y9 288 aaPredicted RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 ORC6Q9Y5N6 252 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ADAMTSL1Q8N6G6 1762 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 NPHP4O75161 1426 aaPredicted RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 NUP160Q12769 1436 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 HELZP42694 1942 aaKnown RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 ADAMTS12P58397 1594 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 RB1CC1Q8TDY2 1594 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 MYO5CQ9NQX4 1742 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 CAMSAP2Q08AD1 1489 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 GAPVD1Q14C86 1478 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 ZNF518AQ6AHZ1 1483 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 PLB1Q6P1J6 1458 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 MAGI1Q96QZ7 1491 aaPredicted RBP0.86□□□□□ -2.27
SMC4-220ENST00000488017 ZNF106Q9H2Y7 1883 aaKnown RBP0.86□□□□□ -2.27
SMC4-220ENST00000488017 DOCK5Q9H7D0 1870 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 SMARCA4P51532 1647 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 MICAL3Q7RTP6 2002 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 LRPPRCP42704 1394 aaKnown RBP0.86□□□□□ -2.27
SMC4-220ENST00000488017 MAP3K5Q99683 1374 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 LTN1O94822 1766 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 ANKRD36CQ5JPF3 1778 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 KDM3BQ7LBC6 1761 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 MYH8P13535 1937 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 ALPK3Q96L96 1907 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 ZC3H13Q5T200 1668 aaKnown RBP0.86□□□□□ -2.27
SMC4-220ENST00000488017 ITSN2Q9NZM3 1697 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 IGLV10-54A0A075B6I4 117 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 SDHAF1A6NFY7 115 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms